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MetaSUB-CAMP
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camp_short-read-quality-control
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Minor cleanup of paths
#21
JamesRH
opened
8 months ago
0
Multiple errors with test dataset
#20
lmszydlowski
opened
1 year ago
1
Running the test problem
#19
lmszydlowski
closed
1 year ago
1
Cannot create the multiqc conda environment
#18
juanu
opened
1 year ago
1
Problems to create conda environment
#17
juanu
closed
1 year ago
1
samples.csv formatting issue with numbers only samples
#16
qiutip
closed
1 year ago
1
fastp seems to be using up to 16 threads instead of 24)
#15
rbtoscan
closed
1 year ago
1
why remove adopter by fastp and AdapterRemoval?
#14
yuvaramsingh94
closed
1 year ago
1
Module won't process reads in fastq format
#13
katkopera
closed
1 year ago
1
incomplete paths to samples in final_reports/samples.csv output file - correct Snakefile
#12
katkopera
closed
1 year ago
6
ResolvePackageNotFound: - click_default_group==1.2=py_1
#11
katkopera
closed
1 year ago
1
Cluster execution fails with "--slurm" flag
#10
katkopera
closed
1 year ago
4
Issues running bbmap tools (solved)
#9
rbtoscan
closed
1 year ago
2
issue due to multiqc output file path
#8
yuvaramsingh94
closed
1 year ago
1
Found conflicts with setting up the conda environment from yaml files
#7
yuvaramsingh94
closed
1 year ago
4
pytest fails due to hardcoded paths
#6
yuvaramsingh94
closed
1 year ago
2
Inconsistent naming of parameters in Snakefile and parameters.yaml
#5
katkopera
closed
1 year ago
2
merge main to tom
#4
tommyfuu
closed
1 year ago
0
revised to ensure fastqc has enough space
#3
tommyfuu
closed
1 year ago
0
Tom
#2
tommyfuu
closed
1 year ago
0
Tom
#1
tommyfuu
closed
1 year ago
0