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MiguelCos
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Fragterminomics
Annotation and processing of peptides from FragPipe search results
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annotate_peptides function does not properly label specificity as 'unspecific'.
#15
MiguelCos
opened
1 year ago
0
modified documentation of annotate_peptide function
#14
niklasbinder
closed
1 year ago
0
function nterm_annot needs to work with the psm.tsv file instead of the peptide.tsv
#13
MiguelCos
opened
1 year ago
0
New feature: implement heatmap visualization of amino acid counts
#12
MiguelCos
opened
1 year ago
0
annotate_nterm function would not work with identified TMT modification is 304.2071
#11
MiguelCos
opened
2 years ago
0
The annotate_peptides function generate character columns for the positional info of the peptides
#10
MiguelCos
opened
2 years ago
0
Set a general `theme` for all plots
#9
MiguelCos
opened
2 years ago
0
enrichplot::dotplot does not accept ggplot aesthetics in 4.1.0
#8
MiguelCos
opened
2 years ago
0
Add info in the tutorial regarding the required packages to reproduce the analysis
#7
MiguelCos
opened
2 years ago
0
The function categorize_nterm needs to be checked
#6
MiguelCos
closed
2 years ago
1
feature_fdr_correction function
#5
MiguelCos
opened
2 years ago
1
annotate_peptides and annotate_nterm functions - need correction
#4
MiguelCos
opened
2 years ago
0
A progress bar would be useful for the annotate_peptides function
#3
MiguelCos
opened
2 years ago
0
annotate_peptides function does not show error for mismatching identifiers
#2
MiguelCos
opened
2 years ago
1
feature_fdr_correction function only working with Fragpipe-specific columns
#1
MiguelCos
opened
2 years ago
0