ModelSEED Model-SEED-core issues

ModelSEED / Model-SEED-core

The Model SEED is a tool for building, curating, and analyzing gonome-scale metabolic models. Visit the Model SEED homepage for installation instructions and full feature documentation.

http://bionet.mcs.anl.gov/index.php/Model_SEED_Homepage

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issues

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bcloadmedia with -overwrite 1 doesn't clear media_compound

#77 mdejongh closed 13 years ago
1
mdlparseSBML Error

#76 jamesclulow closed 13 years ago
1
Model loading

#75 alikpel closed 13 years ago
3
mdlcreatemodel error

#74 jamesclulow closed 13 years ago
1
Error during install

#73 linsalrob closed 13 years ago
3
error simulating single knockouts

#72 levinas closed 12 years ago
1
error creating new workspace with ./msswitchworkspace

#71 jplfaria closed 13 years ago
0
mslogin error

#70 jamesclulow closed 13 years ago
2
Error in ms-config success announcement

#69 jamesclulow closed 13 years ago
1
Error Making MFAToolkit...

#68 jamesclulow closed 13 years ago
6
fbacheckgrowth tries to create an existing directory

#67 levinas closed 12 years ago
3
logging into a Model SEED

#66 alikpel closed 13 years ago
6
ModelDriver parsesbml error

#65 EliKrumholz closed 13 years ago
2
logging into a Model SEED

#64 alikpel closed 13 years ago
1
ms-config clean/unload

#63 levinas closed 13 years ago
0
mslogin message

#62 levinas closed 13 years ago
1
Run Model SEED config

#61 alikpel closed 13 years ago
3
fbafva operation does not work properly

#60 pvilaca closed 13 years ago
1
Indexing of fields in compound_alias

#59 samseaver closed 13 years ago
2
irregular caching error

#58 samseaver closed 12 years ago
1
Error importing user model from SEED

#57 jamesclulow closed 13 years ago
2
Error during installation on Rob Edward's machine

#56 cshenry closed 13 years ago
3
Configuration problems on biologin-4

#55 mdejongh closed 13 years ago
2
Misnamed compound id in database download

#54 samseaver closed 13 years ago
3
problem when running /Model-SEED-core/bin/ms-config load on a mysql config

#53 raphyz closed 13 years ago
2
ModelDB-sqlite.tgz missing from http://bioseed.mcs.anl.gov/~devoid/

#52 cshenry closed 13 years ago
2
Missing file in MFAToolkit Input directory

#51 samseaver closed 13 years ago
1
FBAMODEL.t consumes 4G memory, runs forever

#50 devoid closed 13 years ago
1
CHI fails on when caching undef value

#49 devoid closed 13 years ago
3
locating the files I upload to the database

#48 tammyk closed 13 years ago
2
GapFilling in local environment

#47 samseaver closed 13 years ago
1
Database error and warning when running fbafva and testmodelgrowth

#46 mdejongh closed 13 years ago
2
error using loadmodelfromfile

#45 mdejongh closed 13 years ago
4
SeedClient not returning any results

#44 devoid closed 13 years ago
2
loadmodelfromfile issues

#43 samseaver closed 13 years ago
2
printmodelfiles issues

#42 samseaver closed 13 years ago
2
reminder - mysql installation not yet possible

#41 raphyz closed 13 years ago
1
would be nice if commands had a usage message

#40 raphyz closed 13 years ago
3
problem importing a model

#39 raphyz closed 13 years ago
4
CPLEX entires error on makefile (bioenvironment)

#38 jplfaria closed 13 years ago
2
ModelDriver Catch die()s and report in a nicer way

#37 devoid closed 13 years ago
1
Function on importmodel still goes after dbd:mysql (after loading reactions) [Using SQLite]

#36 jplfaria closed 13 years ago
1
new install problems

#35 raphyz closed 13 years ago
1
Roles not recognized first time a genome id is used

#34 samseaver closed 13 years ago
2
Build issue with MFAToolkit in Bio-enviornment

#33 devoid closed 13 years ago
3
Error encountered at the end of model import (using SQLite)

#32 jplfaria closed 13 years ago
1
SQLite error during import model

#31 jplfaria closed 13 years ago
7
Problem with TestingHelper.pm in windows

#30 cshenry closed 12 years ago
4
problem with sandbox install on biologin-4

#29 mdejongh closed 13 years ago
1
Can't run classifyreactions

#28 mdejongh closed 13 years ago
2

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