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MonashBioinformaticsPlatform
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laxy
Laxy Genomics Pipelines
Apache License 2.0
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Pipeline erroring out with segmentation error (139)
#287
amdouek
closed
2 months ago
1
Distracting progress bar and layout popping on /#/job page
#286
pansapiens
opened
7 months ago
1
Present appropriate nf-core/rnaseq Salmon counts for Degust (edgeR/limma), depending on detected experiment
#285
pansapiens
opened
7 months ago
0
is_paired.py pair-end filename detection script failing
#284
pansapiens
opened
7 months ago
0
Detect and warn if samples files with I1 / I2 FASTQ files are included
#283
pansapiens
opened
7 months ago
1
Allow nf-core/rnaseq UI to handle technical replicates
#282
pansapiens
opened
9 months ago
0
Add sanity check for FASTQs with UMI in header
#281
pansapiens
opened
1 year ago
0
Turn on retries for rsync bulk move task
#280
pansapiens
closed
1 year ago
0
Laxy analysis has been running for 5 days on one sample
#279
angpiz
closed
1 year ago
1
/admin/laxy_backend/accesstoken query fails
#278
pansapiens
opened
1 year ago
0
ENA API has changed - fix ENA/SRA search
#277
pansapiens
opened
1 year ago
1
Bump redis from 3.0.1 to 4.4.4
#276
dependabot[bot]
closed
1 year ago
1
Bump redis from 3.0.1 to 4.5.3
#275
dependabot[bot]
closed
1 year ago
1
Bump sentry-sdk from 0.17.0 to 1.14.0
#274
dependabot[bot]
closed
1 year ago
1
Error executing process > 'NFCORE_RNASEQ:RNASEQ:ALIGN_STAR:STAR_ALIGN_IGENOMES
#273
angpiz
closed
1 year ago
3
Bump minimist and mkdirp in /laxy_frontend
#272
dependabot[bot]
closed
1 year ago
1
Bump werkzeug from 0.15.3 to 2.2.3
#271
dependabot[bot]
closed
1 year ago
1
Bump ipython from 7.16.1 to 8.10.0
#270
dependabot[bot]
closed
1 year ago
1
Bump http-cache-semantics and npm in /laxy_frontend
#269
dependabot[bot]
closed
1 year ago
1
Bump werkzeug from 0.15.3 to 0.15.5
#268
dependabot[bot]
closed
1 year ago
1
Temporary PR to test rollback branch
#267
pansapiens
closed
1 year ago
0
Bump py from 1.5.2 to 1.11.0
#266
dependabot[bot]
closed
1 year ago
1
Bump minimatch from 3.0.4 to 3.0.8 in /laxy_frontend
#265
dependabot[bot]
closed
1 year ago
1
Bump qs from 6.5.2 to 6.5.3 in /laxy_frontend
#264
dependabot[bot]
closed
1 year ago
1
rsync can fail with zero exit code: impacts bulk_move_job_rsync
#263
pansapiens
opened
1 year ago
1
nf-core/rnaseq: Genome selection in UI doesn't always match version used by backend
#262
pansapiens
opened
1 year ago
0
Workflow failed
#261
angpiz
closed
1 year ago
1
Bump express from 4.16.4 to 4.18.2 in /laxy_frontend
#260
dependabot[bot]
closed
1 year ago
1
Bump certifi from 2018.1.18 to 2022.12.7
#259
dependabot[bot]
closed
1 year ago
1
Bump decode-uri-component from 0.2.0 to 0.2.2 in /laxy_frontend
#258
dependabot[bot]
closed
1 year ago
1
Bump loader-utils and html-webpack-plugin in /laxy_frontend
#257
dependabot[bot]
closed
1 year ago
1
Bump loader-utils and html-webpack-plugin in /laxy_frontend
#256
dependabot[bot]
closed
1 year ago
1
Bump got and npm in /laxy_frontend
#255
dependabot[bot]
closed
1 year ago
1
Bump postcss from 7.0.14 to 7.0.39 in /laxy_frontend
#254
dependabot[bot]
closed
1 year ago
1
Include better descriptions at top of pipelines
#253
pansapiens
opened
1 year ago
0
Detect FASTQs with zero reads, ignore these or fail fast
#252
pansapiens
opened
1 year ago
0
laxydl: Starting a duplicate download with aria2c backend causes one to fail, hang
#251
pansapiens
opened
1 year ago
0
Bump flower from 0.9.7 to 1.2.0
#250
dependabot[bot]
closed
1 year ago
1
Bump django-celery-results from 2.2.0 to 2.4.0
#249
dependabot[bot]
closed
1 year ago
1
Bump codecov from 2.0.14 to 2.0.16
#248
dependabot[bot]
closed
1 year ago
1
Bump moment from 2.24.0 to 2.29.4 in /laxy_frontend
#247
dependabot[bot]
closed
1 year ago
1
Bump lxml from 4.6.3 to 4.9.1
#246
dependabot[bot]
closed
1 year ago
1
Bump numpy from 1.15.1 to 1.22.0
#245
dependabot[bot]
closed
1 year ago
1
Make it clearer direct uploads aren't supported
#244
pansapiens
opened
2 years ago
0
Bump eventsource from 1.0.7 to 1.1.1 in /laxy_frontend
#243
dependabot[bot]
closed
1 year ago
1
Bump pyjwt from 1.7.1 to 2.4.0
#242
dependabot[bot]
closed
1 year ago
1
Bump django from 2.2.20 to 2.2.28
#241
dependabot[bot]
closed
1 year ago
0
Bump moment from 2.24.0 to 2.29.2 in /laxy_frontend
#240
dependabot[bot]
closed
2 years ago
1
UMI support in RNAseq pipelines
#239
pansapiens
opened
2 years ago
0
Bump paramiko from 2.7.1 to 2.10.1
#238
dependabot[bot]
closed
1 year ago
1
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