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MouseLand
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suite2p
cell detection in calcium imaging recordings
http://www.suite2p.org
GNU General Public License v3.0
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tifffile Errors Logged with tifffile.read_uic_tag in ome.tif
#974
jmdelahanty
closed
1 year ago
2
BUG: Running suite2p interrupted (no file/directory found)
#973
marytunun
closed
1 year ago
5
BUG: ops['nblocks'] ops['xblock'] ops['yblock'] not saved in suite2p 0.13.0?
#972
jlarsch
opened
1 year ago
0
Upgrade fails due to `Cannot uninstall 'llvmlite'` error
#971
zelunw
closed
1 year ago
1
FEATURE: Return X Y matrix of ROI mask to visualize morphology across days
#970
neurovanlin
closed
1 year ago
3
:bug: Improving the compatibility of saving TIF files
#969
Achuan-2
closed
1 year ago
9
Update README.md
#968
carsen-stringer
closed
1 year ago
0
Dev
#967
carsen-stringer
closed
1 year ago
1
merge main into dev
#966
carsen-stringer
closed
1 year ago
0
Visualisation issues in the ROI window after running detection
#965
MARGINMB
closed
1 year ago
2
merging ROIs based on correlation and spatial constraints
#964
irinamarguerita
closed
1 year ago
1
DOC: For non-neuronal cells, should the deconvolved output be disregarded?
#963
RandallJEllis
closed
1 year ago
3
Dev
#962
carsen-stringer
closed
1 year ago
1
Dev
#961
carsen-stringer
closed
1 year ago
1
BUG: rangeslider issues on mac
#960
carsen-stringer
opened
1 year ago
0
BUG: Cannot load processed data into GUI after running suite2p
#959
linjianian
closed
1 year ago
2
Dependency and GUI updates
#958
chriski777
closed
1 year ago
2
Installation error: Failed to build scanimage-tiff-reader
#957
Elsword016
closed
1 year ago
1
DOC: Is Rastermap and PC sorted activity display in GUI colormapped to data normalized across ROIs, or within ROIs?
#956
vickerse1
closed
1 year ago
2
FEATURE: Allow loading MESc files with image data
#955
zoltanhock
closed
1 year ago
1
BUG: sparse detection not available via GUI
#954
nspiller
closed
1 year ago
1
BUG: GUI not displaying any images or data visualisation
#953
scientist-in-pain
closed
1 year ago
2
BUG: Error with extracting manually drawn ROIs in multiplane/combined image file
#952
pbokiniec
closed
1 year ago
1
FEATURE: Add .nd2 input format in the GUI
#951
b-grimaud
closed
1 year ago
1
installation error about scanimage-tiff-reader
#950
HuijeongJeong
closed
1 year ago
7
DOC: Specifying bad frames (for photostim artifacts) when concatenating multiday recordings
#949
KangByungwoo
closed
1 year ago
1
BUG: Error when ROI Detection is started
#948
maristanye
closed
1 year ago
2
issue with Qt setting DPI awareness info
#947
apostolideslab
opened
1 year ago
5
ScanImage TiffReader not able to read the sample data
#946
marytunun
closed
1 year ago
1
ROI not detected on Fish
#945
bdshaw37
closed
1 year ago
1
FEATURE: adding leading zeros to the reg_tif file list
#944
zahramansoor
closed
1 year ago
2
DOC: temporal high pass filter is applied to binned movie
#943
nspiller
closed
1 year ago
1
BUG: <not able to run the suite2p GUI: with type error>
#942
gistempert
closed
1 year ago
2
Cell segmentation not capturing cells - one-photon epifluorescence
#941
RandallJEllis
closed
1 year ago
13
Strange mean image
#940
jacobaclay
closed
1 year ago
4
(Over/under)-correlated traces
#939
jacobaclay
closed
1 year ago
1
ROIs don't seem to match mean image
#938
jacobaclay
closed
1 year ago
1
BUG: Footprint takes integer values suite2p v0.12.0
#937
jacobaclay
closed
1 year ago
3
DOC: how does suite2p determine the order in which to concatenate tiff files
#936
KangByungwoo
closed
1 year ago
1
BUG: jupyter/Run Suite2p.ipynb not working
#935
nspiller
closed
1 year ago
1
BUG: error when saving ops file in gui
#934
ransona
closed
1 year ago
1
FEATURE: multi-session ROI matching
#933
rozmar
opened
1 year ago
6
ROI classification into somas, dendrites and rest?
#932
samupicard
closed
1 year ago
1
FEATURE: Allow loading of NWB files with image data
#931
rly
closed
1 year ago
2
BUG: Input array broadcast error when th_badframes = 0
#930
evanpc
closed
1 year ago
13
manual labeling extraction
#929
immj22
opened
1 year ago
3
Fixes 2channel manual labeling, saving new default ops, and save_nwb issues.
#928
chriski777
closed
1 year ago
1
BUG: ops['subfolders'] ignored when loading in GUI
#927
samupicard
opened
1 year ago
5
ROI merge not working
#926
yz22015
closed
1 year ago
1
conform to function signature and usage pattern a few lines above
#925
itsb
closed
1 year ago
0
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