NP-Omix BioCompass issues

NP-Omix / BioCompass

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Bump wheel from 0.29.0 to 0.38.1

#58 dependabot[bot] opened 1 year ago
0
Bump pip from 8.1.2 to 21.1

#57 dependabot[bot] opened 2 years ago
0
Bump pip from 8.1.2 to 19.2

#56 dependabot[bot] closed 2 years ago
1
Convert to Python3

#55 ralic opened 7 years ago
0
Ignore "noisy" clusters

#54 castelao opened 7 years ago
0
Nonsense epsilon

#53 castelao opened 7 years ago
0
One more modification to the text structure

#52 tiagolbiotech closed 7 years ago
0
Fixing usage.rst structure erros

#51 tiagolbiotech closed 7 years ago
0
Updating basic usage instructions

#50 tiagolbiotech closed 7 years ago
0
Error testing version 0.9.2

#49 tiagolbiotech closed 7 years ago
4
Dev

#48 castelao closed 7 years ago
0
Bug creating multigeneblast database at version 0.9.1

#47 tiagolbiotech closed 7 years ago
0
Goals

#46 tiagolbiotech opened 8 years ago
0
BUGFIX #44

#45 castelao closed 8 years ago
0
Testing BioCompass 0.9.0

#44 tiagolbiotech closed 7 years ago
0
0.9.0

#43 castelao closed 8 years ago
0
Updating usage instructions after re-testing BioCompass 0.6

#42 tiagolbiotech closed 8 years ago
0
Updating required biopython version.

#41 castelao closed 8 years ago
0
Proofreading and updating docs (and README)

#40 tiagolbiotech closed 8 years ago
0
Testing BioCompass in AWS EC2, installing requirements using conda

#39 tiagolbiotech opened 8 years ago
5
Testing BioCompass in AWS EC2 instance type ami-05384865 (ubuntu-wily-15.10-amd64-server)

#38 tiagolbiotech opened 8 years ago
2
Updating usage.rst

#37 tiagolbiotech closed 8 years ago
0
Minor error at step C of Makefile

#36 tiagolbiotech closed 8 years ago
2
Several bugfixes

#35 castelao closed 8 years ago
0
Dev

#34 castelao closed 8 years ago
0
Moving changes from dev branch into master branch

#33 castelao closed 8 years ago
0
Minor upgrade 0.5

#32 tiagolbiotech closed 8 years ago
0
Fixing repository to NP-Omix instead of castelao.

#31 castelao closed 8 years ago
0
Updating package name at documentation.

#30 castelao closed 8 years ago
0
Upgrade html

#29 tiagolbiotech closed 8 years ago
0
Removing CNAME. There is some conflict.

#28 castelao closed 8 years ago
0
Dev

#27 castelao closed 8 years ago
0
Initialize unitests system

#26 castelao opened 8 years ago
0
Migrate command line system to Click

#25 castelao closed 7 years ago
0
Add feature to check if MiBIG cluster are update

#24 tiagolbiotech closed 8 years ago
2
Incorporate category_gen.py into bioCompass

#23 castelao closed 7 years ago
0
Download MiBIG to current BioCompass

#22 tiagolbiotech closed 8 years ago
1
Incorporate table_1_extender.py into bioCompass

#21 castelao closed 7 years ago
0
Incorporate table_1_gen.py

#20 castelao opened 8 years ago
0
Avoid self loops in the final edge output

#19 castelao opened 8 years ago
0
Consider self hit

#18 castelao opened 8 years ago
0
BUGFIX: table_1_gen.py and makedb.py

#17 castelao closed 8 years ago
0
Some possible enhancements after publishing first version

#16 tiagolbiotech opened 8 years ago
0
Trying to install python package in the wrong place.

#15 castelao closed 8 years ago
0
Adding some support files and other improvements

#14 castelao closed 8 years ago
0
Implementing up to step H and minimizing hardcoded paths

#13 castelao closed 8 years ago
0
Fail creating the multigeneBLAST database

#12 tiagolbiotech closed 8 years ago
1
Fail if MultiGeneBlast is not in the PATH

#11 castelao closed 8 years ago
0
Failed to run multigeneblast from other folder

#10 tiagolbiotech closed 8 years ago
1
Minimize hard coded paths in Makefile

#9 castelao closed 8 years ago
0