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Nelly-Barret
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BETTER-fairificator
The fairification tools for BETTER project.
https://www.better-health-project.eu/
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move metadata columns names to constants
#82
Nelly-Barret
closed
2 days ago
0
Metadata column names in constants
#81
Nelly-Barret
closed
2 days ago
1
implementing Execution table
#80
Nelly-Barret
closed
3 days ago
0
Save the execution parameters in the database
#79
Nelly-Barret
closed
3 days ago
2
fixed mapped values given to Transform
#78
Nelly-Barret
closed
1 week ago
0
create indexes + parameter to control index creation
#77
Nelly-Barret
closed
1 week ago
0
Value is not mapped to ontology values?
#76
Nelly-Barret
closed
1 week ago
2
value is 0 for some ExaminationRecord instances
#75
Nelly-Barret
closed
1 week ago
1
desolidarize ETL steps from one another
#74
Nelly-Barret
closed
1 week ago
0
Desolidarize Extract, Transform and Load classes
#73
Nelly-Barret
closed
1 week ago
1
clinical and phenotypic variables were inverted
#72
Nelly-Barret
closed
1 week ago
0
Broken Examination category?
#71
Nelly-Barret
closed
1 week ago
3
type hinting
#70
Nelly-Barret
closed
1 week ago
0
Create indexes
#69
Nelly-Barret
closed
1 week ago
2
annotated calls
#68
Nelly-Barret
closed
1 week ago
0
Get rid of default method parameters
#67
Nelly-Barret
closed
1 week ago
0
Add hint type everywhere
#66
Nelly-Barret
closed
1 week ago
1
Use annotated calls everywhere
#65
Nelly-Barret
closed
1 week ago
1
Do not add NaN fields to Sample
#64
Nelly-Barret
closed
1 week ago
0
Fix 58
#63
Nelly-Barret
closed
1 week ago
0
Int identifiers
#62
Nelly-Barret
opened
1 week ago
0
Draw the catalog for Rheasoft
#61
Nelly-Barret
closed
1 week ago
3
NaN values still exist
#60
Nelly-Barret
closed
1 week ago
3
Defined locales for each medical center + locale positioning in the ETL
#59
Nelly-Barret
closed
1 week ago
0
Date conversion
#58
Nelly-Barret
closed
1 week ago
18
Adding missing parameters and made them all required
#57
Nelly-Barret
closed
1 week ago
0
Fix 50: several data files as argument + internalize more of the main
#56
Nelly-Barret
closed
1 week ago
0
Add missing user parameters
#55
Nelly-Barret
closed
1 week ago
1
Directly store the log file at the right place
#54
Nelly-Barret
opened
2 weeks ago
0
Fixed initial counter value
#53
Nelly-Barret
closed
2 weeks ago
0
Hospital id is 2 instead of 1
#52
Nelly-Barret
closed
2 weeks ago
1
Fix 41: global identifiers across runs + fixed duplicated ids
#51
Nelly-Barret
closed
2 weeks ago
0
Allow several data files as input
#50
Nelly-Barret
closed
1 week ago
2
Cast int and float values
#49
Nelly-Barret
closed
1 week ago
3
Sample and Patient references
#48
Nelly-Barret
closed
2 weeks ago
1
Do not use default values
#47
Nelly-Barret
closed
1 week ago
1
Fix 41: create Identifiers as a class instead of string
#46
Nelly-Barret
closed
2 weeks ago
0
Enable cache in CI/CD
#45
Nelly-Barret
opened
2 weeks ago
0
conform to data model + created missing classes (diseases+genomic)
#44
Nelly-Barret
closed
2 weeks ago
0
Fix 42
#43
Nelly-Barret
closed
2 weeks ago
0
Conformance to latest data model
#42
Nelly-Barret
closed
2 weeks ago
3
Manage identifiers
#41
Nelly-Barret
closed
2 weeks ago
9
BETTER FAIR model
#40
Nelly-Barret
closed
1 week ago
1
use my own configure.sh instead of GitHub one for pipelines
#39
Nelly-Barret
closed
2 weeks ago
0
Fix 35
#38
Nelly-Barret
closed
2 weeks ago
0
How to run the code in command-line?
#37
Nelly-Barret
closed
2 weeks ago
4
Trying to not create test logs + fixed tests
#36
Nelly-Barret
closed
2 weeks ago
0
Do not generate a log file when running tests
#35
Nelly-Barret
opened
2 weeks ago
3
implemented two update policies (upsert or replace)
#34
Nelly-Barret
closed
2 weeks ago
0
constants for Config + default DB name
#33
Nelly-Barret
closed
2 weeks ago
0
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