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NeurodataWithoutBorders
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lindi
Linked Data Interface (LINDI) - cloud-friendly access to NWB data
BSD 3-Clause "New" or "Revised" License
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implement templates for rfs
#49
magland
closed
7 months ago
1
Proposed simplification: remove support for wrapping h5py in LindiH5pyFile
#48
magland
closed
7 months ago
1
Add metadata to dtype when kind is 'O'
#47
magland
closed
7 months ago
1
WIP: expand test coverage
#46
magland
closed
7 months ago
1
allow unicode scalar
#45
magland
closed
7 months ago
1
implement chunks property
#44
magland
closed
7 months ago
1
Update README
#43
magland
closed
7 months ago
2
Implement staging store for preparing .nwb.json for upload to cloud
#42
magland
closed
7 months ago
11
add authors to pyproject.toml
#41
magland
closed
7 months ago
1
support dicts in reference file system for json files
#40
magland
closed
7 months ago
4
implement id for group/dataset as a string
#39
magland
closed
7 months ago
1
Consider making LindiH5pyFile a subclass of LindiH5pyGroup
#38
magland
opened
8 months ago
1
support track_order parameter when creating groups
#37
magland
opened
8 months ago
0
Resolve dataset of references
#36
rly
closed
7 months ago
1
Specify zarr codec when creating a dataset
#35
magland
closed
7 months ago
7
Working example: augment a DANDI NWB file and upload to cloud
#34
magland
closed
7 months ago
0
Example for changing metadata (e.g. subject id) in NWB file
#33
yarikoptic
closed
7 months ago
5
Pointers from our conversation
#32
yarikoptic
opened
8 months ago
1
Add github action to shellcheck main on push and PRs
#31
yarikoptic
closed
8 months ago
1
Add codespell support (config, workflow) + make it fix a typo
#30
yarikoptic
closed
8 months ago
0
region references
#29
magland
closed
8 months ago
3
Write to Zarr store using h5py-like interface
#28
magland
closed
8 months ago
6
preparing to publish - expand test coverage and update readme
#27
magland
closed
8 months ago
0
add misc tests
#26
magland
closed
8 months ago
0
LindiReferenceFileSystemStore with DANDI support
#25
magland
closed
8 months ago
2
properly close resources
#24
magland
closed
8 months ago
0
handle reading of remote nwb files from embargoed dandisets
#23
magland
closed
8 months ago
1
LindiH5pyFile - implement close() properly
#22
magland
opened
8 months ago
0
Refactoring
#21
magland
closed
8 months ago
3
WIP: handle references in attrs and datasets
#20
magland
closed
8 months ago
0
handle compound dtypes
#19
magland
closed
8 months ago
2
handle boolean type for arrays
#18
magland
closed
8 months ago
1
HDF5 reader or Zarr reader?
#17
bendichter
closed
8 months ago
9
exclude zattrs when empty
#16
magland
closed
8 months ago
0
Don't write .zattrs if there are no attributes
#15
rly
closed
8 months ago
0
encode nan, inf, -inf attributes as strings
#14
magland
closed
8 months ago
1
Document special attributes and mapping
#13
rly
opened
8 months ago
10
Port tests from h5tojson using this json format
#12
rly
opened
8 months ago
0
Handling NaN in attributes and elsewhere
#11
rly
closed
8 months ago
3
update README.md
#10
magland
closed
8 months ago
0
CI tests via gh actions
#9
magland
closed
8 months ago
0
Initial package
#8
magland
closed
8 months ago
0
Discuss library name
#7
oruebel
closed
8 months ago
7
slow get_chunk_info => need link to hdf5 mechanism
#6
magland
closed
8 months ago
1
example of numpy array with complicated type
#5
magland
closed
8 months ago
0
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