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PMassicotte / eemR

Utilities for pre-processing emission-excitation-matrix (EEM).
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dissolved-organic-matter emission excitation fluorescence optics

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eemR

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The eemR package implements various functions used calculate metrics from excitation-emission matrix (EEM) as well as to preform pre-processing corrections before PARAFAC analysis.

The latest release of the package from CRAN can be installed with:

install.packages("eemR")

The latest development version of the package can be installed with:

devtools::install_github("PMassicotte/eemR")

Vignette

A detailed vignette presenting the package which can be viewed using:

vignette(topic = "introduction", package = "eemR")

Supported spectrophotometers

At the moment, EEMs generated by the following spectrofluorometer are officially supported.

EEM can be read using the eem_read() function. Please fill an issue if you have other file formats you would like to add to the package. You can also write your own import function!