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PacificBiosciences
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ANGEL
Robust Open Reading Frame prediction (ANGLE re-implementation)
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Bio.Alphabet has been removed from Biopython 1.78
#37
yy-liang
closed
3 years ago
3
UnicodeDecodeError at angel_predict.py
#36
yy-liang
opened
4 years ago
1
angel_predict.py takes forever with --use_rev_strand option
#35
LiorFaigon
closed
4 years ago
7
problem running dumb_predict.py -"Cannot find cd-hit! Abort!"
#34
reutnuri
closed
4 years ago
1
Q: ORFs of NA type
#33
emaleckova
closed
4 years ago
1
error on angel_train.py, pickle not produced
#32
veravelasco
closed
4 years ago
2
Fatal error at dumb_predict.py
#31
veravelasco
closed
5 years ago
1
Unable to get classifier.pickle result
#30
chuanyingliu
closed
4 years ago
5
dumb orf prediction
#29
rsalz
closed
5 years ago
1
CD HIT
#28
rsalz
closed
5 years ago
1
Seq "tostring()" method finally outdated
#27
rsalz
closed
5 years ago
2
Problems running angel_predict.py
#26
steffi778
closed
5 years ago
5
Some questions about cds analysis
#25
WayneForever
closed
4 years ago
1
angel_predict.py ：max_depth
#24
MaPengyu
closed
5 years ago
1
issues with build
#23
rsalz
closed
5 years ago
1
ANGEL intermidiate files clean up
#22
aksenia
closed
5 years ago
2
Can not get the 'pickle' file when running 'angle train.py'
#21
ClearloveMiao
closed
5 years ago
2
memory issue while running angel_train.py
#20
ghost
closed
5 years ago
4
Cant extract all .cds predictions with a simple grep - only type:confident
#19
EmilyAmor
closed
4 years ago
1
angel_train.py hangs with 12 cores
#18
EmilyAmor
closed
6 years ago
1
A problem with running angel_train.py
#17
lijl459
closed
6 years ago
2
A problem with running ANGEL
#16
ClearloveMiao
closed
4 years ago
12
Some problem about CD-HIT when using angel_make_training_set.py
#15
lijl459
closed
4 years ago
1
Some problems about ANGEL.cds
#14
Trandamere
closed
4 years ago
1
angel_train.py error
#13
Trandamere
closed
6 years ago
4
Update README.md
#12
mhsieh
closed
7 years ago
0
All transcripts strand are forward (+)
#11
linglingtingfei
closed
7 years ago
1
ANGEL classifier training: not UTR file
#10
uso2015
closed
4 years ago
2
Complete cds or partial cds?
#9
linglingtingfei
closed
7 years ago
1
angel_predict.py gets stuck and does nothing
#8
linglingtingfei
closed
4 years ago
13
feature: adding CDS track to output GFF
#7
Magdoll
opened
7 years ago
2
angel_train.py hanging with refseq sequences
#6
sjin09
closed
8 years ago
7
posted wrong place, please delete this thread
#5
pengchy
closed
9 years ago
0
Feature request: --firstORF instead of longest ORF
#4
Magdoll
closed
8 years ago
1
scipy required
#3
adeslatt
closed
9 years ago
1
Questions about ANGEL, thanks!
#2
lamz138138
closed
9 years ago
18
Spelling Correction from Dawson's Spelling Bee
#1
dawsbot
closed
8 years ago
2