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PacificBiosciences
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pbbioconda
PacBio Secondary Analysis Tools on Bioconda. Contains list of PacBio packages available via conda.
BSD 3-Clause Clear License
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Confusion about PacBio IDs
#611
TinyTasy
closed
10 months ago
1
lima after ccs: handling of kinetics tags
#610
gevro
closed
11 months ago
1
segfault with PBSV
#609
jamesdalg
closed
10 months ago
1
skera: reads are both passing and non passing
#608
phpeters
closed
11 months ago
1
Multiplex workflow starting with hifi.bam ...
#607
drkoryjohns
closed
10 months ago
2
[Not a bug report] Fixing header might resolve errors like #345
#606
SHuang-Broad
closed
1 year ago
1
Bug in actc --chunk
#605
gevro
closed
1 year ago
5
collapse error - im tag missing
#604
Ollipolli1909
closed
1 year ago
1
Pacbio ID and genome coordinate
#603
gengbaobao
closed
1 year ago
1
groupdedup error when using heteroduplex split fwd/rev reads
#602
alexb-wang
closed
10 months ago
2
Barcodes not the same as in 10X sequencing
#601
Tianran1
closed
10 months ago
2
isoseq3 collapsed output seems suspicious compare to aligned isoforms.
#600
unique379r
closed
10 months ago
1
Iso-Seq ccs params
#599
kenneditodd
closed
1 year ago
2
parallelizing ccs command
#598
kenneditodd
closed
1 year ago
5
pbfusion output description
#597
gbonilla18
closed
1 year ago
4
pbtk package cannot be found in bioconda channel
#596
gnxsf
closed
1 year ago
1
Identifying variants from de novo assembly files
#595
priyambial123
closed
1 year ago
1
can pbsv call sv with specific reads alignment
#594
leon945945
closed
1 year ago
1
Primrose not listed in the table?
#593
scorreard
closed
1 year ago
5
pbmm2 align --strip does not remove hifi kinetics information
#592
mrvollger
closed
1 year ago
3
How can I use another gtf instead of gencode gtf?
#591
Bo-Yun
closed
1 year ago
5
Guide not clear: when does Skera occur in a MAS seq workflow?
#590
philoel
closed
1 year ago
1
pigeon classify does not produce an output
#589
idarolti
closed
10 months ago
2
using latest version of minimap2 with pbmm2
#588
prasundutta87
closed
1 year ago
1
ValueError: pbfusion - <visualize_fusion.py>
#587
jinhys
closed
1 year ago
14
pbsv call Empty VCF file
#586
543090lee
closed
1 year ago
4
Q: replacement for GCpp?
#585
ptrebert
closed
1 year ago
1
Isoseq collapse filtered some reads and I want to know why
#584
Tianran1
closed
1 year ago
1
pigeon --classify returns no complete splice matches for bulk RNA iso-seq
#583
astulaaa
closed
10 months ago
2
Less than 1% ZMWs pass the CCS step (Lacking full passes)
#582
tejas-j
closed
1 year ago
3
Isoseq3 Error: Segmentation fault
#581
BenSamy2020
closed
1 year ago
3
How to get the latest consensus model .json from PacBio
#580
ywddwed
closed
1 year ago
1
pigeon fail to generate annotated.info.csv file
#579
wangyiqing50
closed
10 months ago
2
QUESTIONS: pbsv call vcf interpretation
#578
lauhinojosa
closed
1 year ago
2
Issues with Indexing pbmm2 aligned file
#577
olaraym
closed
1 year ago
1
Pigeon classify sample_with_cov with -c option not picking all replicates
#576
sum732
closed
1 year ago
2
pbmm2 maintaining ip and pw order
#575
gevro
closed
1 year ago
1
ccs by-strand ip/pw order - documentation clarification
#574
gevro
closed
1 year ago
4
pbmm2 single read align error
#573
yueqitaoo
closed
1 year ago
2
Error when run fc_run
#572
thinkerle
closed
1 year ago
5
FATAL | primrose ERROR
#571
olaraym
closed
1 year ago
1
alignment identity
#570
SziKayLeung
closed
1 year ago
2
isoseq3 refine filters 99.9% of reads due to concatemer detection
#569
mpmargolis
closed
1 year ago
1
Segmentation Fault - Isoseq3
#568
maaraujo10
closed
1 year ago
14
Issue with memory and assembly
#567
yleniach
closed
1 year ago
66
Does GCpp support MPI (parallelisation) natively?
#566
cement-head
closed
1 year ago
1
Update --bam-handles and --bam-handles-verbose to --output-handles and --output-handles-verbose
#565
kristinalweber
closed
1 year ago
2
FATAL ERROR for pigeon sort
#564
oucstar
closed
1 year ago
9
Isoseq3 collapse ignored ids
#563
SziKayLeung
closed
10 months ago
3
PBSV Variant analysis
#562
priyambial123
closed
1 year ago
1
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