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RECETOX
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recetox-aplcms
This is a custom fork of apLCMS containing adaptations for large scale studies.
GNU General Public License v2.0
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Added missing function's documentations
#225
wverastegui
closed
3 days ago
1
Moved import order in the hope it will fix the import bugs
#224
hechth
closed
1 month ago
0
removed outdated files
#223
hechth
closed
1 month ago
0
Fix tests
#222
hechth
closed
1 month ago
1
feature.alignment function refactored
#221
KristinaGomoryova
closed
1 month ago
0
Updated correct time to use precomputed clusters
#220
zargham-ahmad
closed
1 month ago
1
remove_noise function updated
#219
KristinaGomoryova
closed
1 month ago
0
uodate eic denoising to consider big gaps in rt
#218
hechth
closed
1 month ago
0
normix: implement unit test
#217
hechth
opened
4 months ago
0
Implemented unit test for the function load.lcms.R
#216
wverastegui
closed
4 months ago
2
Use peak shape parameters for feature clustering and alignment
#215
hechth
opened
9 months ago
0
Include peak shape parameters in aligned feature table
#214
hechth
opened
9 months ago
0
Release 0.12.0
#213
xtrojak
closed
1 year ago
0
Remove sample name suffixes and peak picking corner case
#212
xtrojak
closed
1 year ago
1
Remove `_intensity` suffix in the intensity and `_rt` suffix in the rt table
#211
hechth
closed
1 year ago
0
Implement new `join` based peak alignment
#210
hechth
opened
1 year ago
0
Update retention time correction step
#209
hechth
closed
1 month ago
1
prepare for new version release
#208
hechth
closed
1 year ago
0
release v0.11.0
#207
hechth
closed
1 year ago
0
Update r-conda.yml with actions/checkout@v3
#206
hechth
closed
1 year ago
1
Update CI action to use node16
#205
hechth
closed
1 year ago
0
fix peak picking corner case when an EIC has between 2 and 10 features
#204
hechth
closed
1 year ago
1
Added CITATION.cff file
#203
hechth
closed
1 year ago
1
test issue
#202
hechth
closed
1 year ago
0
Implemented new version for clustering
#201
hechth
closed
1 year ago
4
Fixed dimension issue in adaptive.bin
#200
zargham-ahmad
closed
1 year ago
1
update test data for extract-features full data test case
#199
hechth
closed
1 year ago
0
implement new way of clustering
#198
hechth
closed
1 year ago
1
Simplified Evaluation Conditions For Test Cases
#197
zargham-ahmad
closed
1 year ago
1
Small refactorings on combine.seq.3 and general adaptive.bin
#196
hechth
closed
1 year ago
1
Fixed CI by restricting icu version
#195
hechth
closed
1 year ago
0
Fix CI
#194
hechth
closed
1 year ago
0
Refactored find.match function
#193
zargham-ahmad
closed
1 year ago
1
noise removal fails on single eic mzml
#192
hechth
closed
1 year ago
0
Implement codecov CI
#191
hechth
closed
1 year ago
0
Rename proc.cdf to remove_noise
#190
xtrojak
closed
1 year ago
1
Curate baseline_correct parameter
#189
xtrojak
closed
1 year ago
1
Update documentation of `baseline_correct`
#188
hechth
closed
1 year ago
0
Remove `baseline_correct` from `adaptive.bin` and `load.data`
#187
hechth
closed
1 year ago
0
Implement rawRR backend to read data from raw files
#186
hechth
opened
1 year ago
0
Ensure the tool also works with all formats compatible with mzR
#185
hechth
closed
4 months ago
3
Re-implement peak detection module
#184
hechth
opened
1 year ago
0
Prepare for release v0.10.3
#183
hechth
closed
1 year ago
1
Introduced parallelism in feature.align
#182
zargham-ahmad
closed
1 year ago
1
0.10.2 release
#181
hechth
closed
1 year ago
1
Fixed column selection bug recover.weaker
#180
zargham-ahmad
closed
1 year ago
2
Introduce parallelism in feature.align
#179
hechth
closed
1 year ago
0
Use updated tolerances in workflows
#178
xtrojak
closed
1 year ago
0
Full test data test for unsupervised and hybrid
#177
zargham-ahmad
closed
1 year ago
1
Aligned features do not contain tolerances
#176
xtrojak
closed
1 year ago
2
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