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RTX
Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)
https://arax.ncats.io/
MIT License
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Merging edges that are reversible even though they're from different KPs
#2420
sundareswarpullela
opened
2 days ago
0
Greater transparency in Ranking?
#2419
edeutsch
opened
3 days ago
0
arax.ncats.io primary endpoint is now tracking the master branch, but...
#2418
edeutsch
closed
4 days ago
2
Test new PathFinder approach
#2417
mohsenht
opened
6 days ago
0
Test our current version of PathFinder with training set (Baseline)
#2416
mohsenht
closed
4 days ago
0
Develop 2 ML models to sort expanded neighbors and select best 50
#2415
mohsenht
opened
6 days ago
0
Add button to ARAX UI for querying KG2?
#2413
amykglen
closed
1 week ago
6
Investigation of failing test: Melphalan treats Nemaline myopathy (must be top 50%)
#2412
edeutsch
opened
1 week ago
19
Clean up deprecated KG2 code, in light of Plover2.0
#2411
amykglen
opened
1 week ago
2
PathFinder: TRAPI query does not work with name, it only works with ids
#2410
mohsenht
opened
1 week ago
0
Tocilizumab seems mis-named
#2409
jaredroach
opened
2 weeks ago
5
Node synonymizer not a superset of SRI node normalizer
#2408
dkoslicki
opened
2 weeks ago
7
Investigate why we are failing a few tests that Aragorn passes
#2407
edeutsch
opened
2 weeks ago
2
verify that cicd.rtx.ai is still automatically registered as a GitHub self-hosted runner on instance start-up
#2406
saramsey
closed
2 days ago
1
move cicd.rtx.ai to us-east-1
#2405
saramsey
closed
1 month ago
2
Changelog since 2024-10-17 the deployment to TEST: Sprint 7 changes for Isopod release
#2404
edeutsch
opened
1 month ago
1
Update general_concepts.json
#2403
dkoslicki
closed
1 month ago
0
xCRG no results
#2402
dkoslicki
closed
1 month ago
2
Move cicd.rtx.ai to `us-east-1`
#2401
amykglen
closed
3 weeks ago
12
Edges with both a qualifier and a support graph should have both [q] and [sg] as a decoration?
#2400
edeutsch
closed
2 weeks ago
2
Fixing xCRG for KG2.10.1 deployment
#2399
kvnthomas98
closed
1 month ago
0
Add Expander one hop and two hops to PathFinder
#2398
mohsenht
opened
1 month ago
1
ARAX finds answers for inferred treats query, but returns 0 results
#2397
amykglen
closed
1 month ago
5
ARAX suddenly returning zero results for Test Case 21
#2396
isbluis
closed
1 month ago
6
ARAX suddenly returning zero results for Test Case 17
#2395
isbluis
closed
1 month ago
2
Adapting PloverDB 2.0 with PathFinder offline build process and solved issues
#2394
mohsenht
closed
1 month ago
0
Issue2388
#2393
kvnthomas98
closed
1 month ago
0
Got an error from ARAX_expander
#2392
chunyuma
closed
1 month ago
5
Unstable xCRG Path Finding Implementation
#2391
chunyuma
closed
1 month ago
4
xCRG returns results but ARAX returns no result
#2390
chunyuma
closed
1 month ago
3
test_ARAXRanker_test9_asset614 failing in `master` since Saturday
#2389
amykglen
closed
1 month ago
4
Speed enhancement: Make Removing general concepts from query graph faster?
#2388
edeutsch
closed
1 month ago
8
CI tests failed due to a change in PloverDB
#2387
mohsenht
closed
1 month ago
1
Upgrade scikit-learn version to the lastest version for xDTD and xCRG
#2386
chunyuma
opened
1 month ago
0
treats patch test failing on arax.ncats.io
#2385
edeutsch
closed
1 month ago
18
test_ARAX_connect.py tests failing?
#2384
edeutsch
closed
1 month ago
9
Updated scikit-learn from 1.1.2 to 1.5.0
#2383
edeutsch
closed
1 month ago
0
update resource limits for arax and kg2
#2382
pabbathreddya2
closed
1 month ago
0
Merge edges from different KPs by primary_knowledge_source
#2381
amykglen
opened
2 months ago
5
KG2.10.1c rollout
#2380
sundareswarpullela
opened
2 months ago
6
Adapting PathFinder with Plover 2.0 API changes
#2379
mohsenht
closed
1 month ago
0
OpenTelemetry issues reported by ARS group
#2378
edeutsch
closed
1 month ago
2
Add ranker to PathFinder
#2377
mohsenht
opened
2 months ago
1
It looks like a lot of the EPC (Evidence, provenance, and confidence) are missing from the edges. Compare the attached edges in the UI
#2376
mohsenht
closed
1 month ago
2
Possibility to move ARAX ranker implementation to the end after we clear all virtual edges in results.
#2375
chunyuma
closed
2 months ago
21
Musings about a KP caching system
#2374
edeutsch
opened
2 months ago
0
Profiling Example 2: MVP1 query: How could we be faster?
#2373
edeutsch
closed
1 month ago
2
Profiling Example 1 Query: how could we be faster?
#2372
edeutsch
closed
1 month ago
2
Relay Blocklist finds
#2371
sundareswarpullela
closed
1 month ago
0
#2352 Improve quality of xCRG Paths
#2370
kvnthomas98
closed
2 months ago
0
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