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Reed-CompBio
/
protein-weaver
A web interface for ontology-based protein network visualization.
https://proteinweaver.reedcompbio.org/
GNU General Public License v3.0
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Adding information about how many proteins are annotated to the GO term
#110
ctrlaltaf
closed
2 months ago
1
Styling regulatory interactions
#109
ctrlaltaf
opened
3 months ago
2
Update README.md
#108
oliverfanderson
closed
3 months ago
0
make GO term search bar wider
#107
annaritz
closed
3 months ago
0
Added cors middleware and removed unused packages
#106
ctrlaltaf
closed
4 months ago
0
Contributing guide for readthedocs
#105
oliverfanderson
closed
4 months ago
0
Merge may 10 2024
#104
oliverfanderson
closed
4 months ago
0
Create CODEOWNERS
#103
oliverfanderson
closed
4 months ago
0
Added docs workflow
#102
ctrlaltaf
closed
4 months ago
0
Implement basic stats panel and fixed pathfinding gds calls
#101
ctrlaltaf
closed
4 months ago
0
Added new import directory
#100
ctrlaltaf
closed
4 months ago
0
Clean up repo
#99
oliverfanderson
closed
3 months ago
0
UI redesign
#98
ctrlaltaf
closed
5 months ago
0
GO term suggestion only populate with GO terms that have edges to proteins in that species
#97
ctrlaltaf
opened
5 months ago
1
Node sizes are relative to how many outgoing edges it has
#96
ctrlaltaf
closed
2 months ago
1
Create script to automatically set up local development of proteinweaver
#95
ctrlaltaf
closed
5 months ago
0
Add feature to automatically create a github issue when encountering a wrong query
#94
ctrlaltaf
closed
5 months ago
2
Add auto-testing for Neo4j database
#93
ctrlaltaf
closed
5 months ago
0
Bump express from 4.18.2 to 4.19.2 in /server
#92
dependabot[bot]
closed
6 months ago
0
Make file-naming conventions more consistent in data folders
#91
oliverfanderson
closed
3 months ago
2
Major March 18, 2024 Update
#90
oliverfanderson
closed
6 months ago
0
Add documentation page
#89
ctrlaltaf
closed
5 months ago
1
Make links to information on selected protein more prominent
#88
oliverfanderson
closed
5 months ago
2
Add more species
#87
oliverfanderson
opened
7 months ago
7
Add predicted GO term annotations with uncertainty models
#86
oliverfanderson
opened
7 months ago
0
Add ability for users to upload own interactome with GO annotations?
#85
oliverfanderson
opened
7 months ago
0
Add LLM-based text processing for queries
#84
oliverfanderson
opened
7 months ago
0
Add statistics for how the subnetwork is significant
#83
oliverfanderson
closed
3 months ago
1
Find more Zebrafish data
#82
oliverfanderson
closed
6 months ago
2
Consider similarity of GO terms
#81
oliverfanderson
opened
7 months ago
3
Select a group of proteins grouped by function
#80
oliverfanderson
opened
7 months ago
1
Select proteins with specific number of common GO terms
#79
oliverfanderson
opened
7 months ago
1
Loading bar shows progress
#78
ctrlaltaf
opened
7 months ago
0
Input name inconsistency
#77
ctrlaltaf
closed
7 months ago
0
UI Redesign Ideas
#76
ctrlaltaf
closed
4 months ago
2
Bump vite from 4.5.1 to 4.5.2 in /client
#75
dependabot[bot]
closed
7 months ago
0
Make it clear if source node is also annotated to GO term
#74
oliverfanderson
closed
7 months ago
0
autocomplete queries anywhere in the name
#73
annaritz
closed
7 months ago
0
VPS can reset neo4j.service unpredictably
#72
ctrlaltaf
closed
7 months ago
0
Frontend Error/UX issues
#71
ctrlaltaf
closed
5 months ago
1
multiple UniProt IDs generate multiple source nodes in the network
#70
annaritz
closed
6 months ago
1
Add pro-GO relationships among parent GO terms
#69
annaritz
closed
6 months ago
2
Add more informative error messages
#68
annaritz
closed
7 months ago
3
Inconsistent error messages between the two methods
#67
annaritz
closed
7 months ago
2
Update live website to match local environment
#66
oliverfanderson
closed
7 months ago
0
Add free use statement or license on landing page
#65
oliverfanderson
closed
9 months ago
0
CSS of nav bar in mobile does not display properly
#64
ctrlaltaf
closed
7 months ago
1
FAQs
#63
oliverfanderson
closed
9 months ago
0
Sidebar not updating when selecting node on mobile devices
#62
oliverfanderson
closed
10 months ago
2
Stable v2.0
#61
ctrlaltaf
closed
10 months ago
0
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