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ReproNim
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reproman
ReproMan (AKA NICEMAN, AKA ReproNim TRD3)
https://reproman.readthedocs.io
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how should we "orchestrate" cleanup
#467
yarikoptic
opened
4 years ago
1
`reproman run` (no parameters) should spit out cmdline summary help
#466
yarikoptic
closed
4 years ago
1
TST: pytest: Register custom 'integration' mark
#465
kyleam
closed
4 years ago
0
run: Dump job spec in meta_directory
#464
kyleam
closed
4 years ago
1
run: .dotfiles are not saved if working in cwd via --jp working_directory
#463
yarikoptic
closed
4 years ago
4
results (data) are not fetched with `datalad-pair` orc on localshell
#462
yarikoptic
closed
4 years ago
2
reproman's datalad-pair-run run record should probably store some "reproman run" construct?
#461
yarikoptic
opened
4 years ago
1
TODO: run - new orchestrator (or documented workflow) for local datalad run "inplace"
#460
yarikoptic
closed
4 years ago
3
[run] Q: we `save` aux .repronim/* output even if no actual output is produced, intentional?
#459
yarikoptic
closed
4 years ago
2
reproman rerun
#458
yarikoptic
opened
5 years ago
2
RF: Singularity hub is back although different.
#457
yarikoptic
closed
4 years ago
1
RF backend-parameters -> backends and add option to list recommended "templates"
#456
yarikoptic
opened
5 years ago
1
reproman job -s (or --all causing a fetch) would crash if job's original location is gone
#455
yarikoptic
closed
4 years ago
1
run: Improve dirty checks
#454
kyleam
closed
5 years ago
1
run: Use new ssh setup in tests (v2)
#453
kyleam
closed
5 years ago
2
run: Use new ssh setup in tests
#452
kyleam
closed
5 years ago
2
BF: job_templates: Call tar with --ignore-failed-read
#451
kyleam
closed
4 years ago
3
TST: Adjust ExceptionInfo use for compatiblity with pytest v5.0.0
#450
kyleam
closed
5 years ago
1
TST: travis: Set up SSH for localhost
#449
kyleam
closed
5 years ago
4
[wishlist] jobs -a kill
#448
yarikoptic
opened
5 years ago
1
"[ERROR ] Remote repository ... is dirty" should may be checked earlier?
#447
yarikoptic
closed
5 years ago
0
Our tracer is incompatible with latest conda
#446
kyleam
closed
4 years ago
3
BF: conda: Temporary pin version in miniconda URL
#445
kyleam
closed
5 years ago
1
run: Verify and adjust state after datalad-{create-sibling,publish}
#444
kyleam
closed
5 years ago
0
test_conda_init_install_and_detect has started to fail on Travis
#443
kyleam
closed
5 years ago
3
run: doesn't trigger obtaining container image on remote location during execution
#442
yarikoptic
closed
4 years ago
3
run: confusing report about failed publish
#441
yarikoptic
closed
4 years ago
0
run: handle presence of a sibling "smoother"?
#440
yarikoptic
opened
5 years ago
0
parse_kv_list: Improve error message for invalid key=value pair
#439
kyleam
closed
5 years ago
1
Initial sketch for the mriqc/fmriprep singularity based workflow
#438
yarikoptic
opened
5 years ago
13
TST: Mark failures due to offline Singularity Hub as expected
#437
kyleam
closed
5 years ago
2
ENH: resource: Tolerate unknown resource parameters in inventory
#436
kyleam
closed
5 years ago
3
BF: Correct reported resource types
#435
kyleam
closed
5 years ago
2
TST: travis: Use py3.5 for REPROMAN_TESTS_ASSUME_SSP build
#434
kyleam
closed
5 years ago
7
Singularity fixes and testing improvements
#433
kyleam
closed
5 years ago
5
ENH: VenvEnvironment: Add system_site_packages attribute
#432
kyleam
closed
5 years ago
5
BF: skip: Don't swallow AttributeError's from condition functions
#431
kyleam
closed
5 years ago
2
RF: revert to default cmp=True for attr.s. Rely on frozen to get hash generated
#430
yarikoptic
closed
5 years ago
9
pytest fails to find/bind fixture: "AttributeError: skipif_no_docker_engine"
#429
yarikoptic
closed
5 years ago
7
venv tracer: reflect in the spec that it was configured to use system-site-packages
#428
yarikoptic
closed
5 years ago
2
retrace venv's path results in retracing VCS under which it is
#427
yarikoptic
opened
5 years ago
1
Singularity 3.x compatibility fixes
#426
yarikoptic
closed
5 years ago
3
RF: use /bin/bash instead of /bin/ed or /sbin/iptables, define centrally
#425
yarikoptic
closed
5 years ago
3
pip can't install reproman
#424
satra
opened
5 years ago
3
replace tracing /sbin/iptables with smth else (/bin/bash?)
#423
yarikoptic
closed
5 years ago
2
BF: exception cannot be logged, preceding debug() already logs its exc_str
#422
yarikoptic
closed
5 years ago
1
TST: travis: Remove 'route' commands for NONETWORK run
#421
kyleam
closed
5 years ago
1
TST: Don't assume Ed is installed
#420
kyleam
closed
5 years ago
4
WIP: collections as dicts
#419
chaselgrove
opened
5 years ago
5
NF(WiP): SpecObject .find and .__iadd__
#418
yarikoptic
opened
5 years ago
4
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