ReproNim segstats_jsonld issues

ReproNim / segstats_jsonld

Script to Export Freesurfer-based Parcellation/Segmentation Stats and Provenance as JSON-LD and NIDM

MIT License

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issues

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Supratentorial volume without ventricles

#50 seanhatton opened 6 months ago
0
fix error message regarding tool name...

#49 dnkennedy opened 1 year ago
1
update FreeSurfer CDE for 7.x

#48 satra closed 1 year ago
0
RDFLIB issues...

#47 dnkennedy opened 1 year ago
1
Update support to FreeSurfer 7.X

#46 dnkennedy closed 1 year ago
3
homogenize name with fsl and ants

#45 jbpoline opened 2 years ago
0
FreeSurfer 7.1.1 has new data elements

#44 tvanerp closed 1 year ago
0
fixed bug when using FS directory and no existing NIDM file

#43 dbkeator closed 3 years ago
0
updated so json mapping file is named after input file. Also fixed bu…

#42 dbkeator closed 3 years ago
0
fixed bug in json mapping files

#41 dbkeator closed 3 years ago
0
Add support for brain volume data in CSV file

#40 dbkeator closed 3 years ago
0
Enable ETelemetery

#39 dnkennedy opened 4 years ago
0
changed required nidm library name to pynidm

#38 dbkeator closed 4 years ago
0
added association from derivative activity to parent project when mat…

#37 dbkeator closed 4 years ago
1
worked out some bugs when using a freesurfer directory

#36 dbkeator closed 4 years ago
0
adding freesurfer cde TTL file to repo for Al Crowley to auto pull fr…

#35 dbkeator closed 4 years ago
0
changed default behavior to save CDEs to separate turtle file and add…

#34 dbkeator closed 4 years ago
0
added fs:DataElement subclass relationship and rdfs:label

#33 dbkeator closed 4 years ago
0
fix: hasUnit should also be under the nidm namespace in the graph

#32 satra closed 4 years ago
1
ENH: add fslmapping

#31 satra closed 4 years ago
0
WIP enh: initial restructuring of repronim freesurfer mapper

#30 satra closed 4 years ago
1
some terms have the same info but different names

#29 jbpoline opened 5 years ago
0
remove superflous pound

#28 adswa closed 5 years ago
1
Uberon

#27 adswa closed 5 years ago
0
Quickfixes to hopefully make tests work

#26 adswa closed 5 years ago
1
retrieve freesurfer version, if available

#25 adswa closed 5 years ago
1
Pointers

#24 adswa closed 5 years ago
1
add nidm-jsonld as submodule, closes #9

#23 adswa closed 5 years ago
0
Data

#22 adswa closed 5 years ago
1
WIP: naming adjustments

#21 adswa closed 5 years ago
0
setup.py not copying XLS file

#20 dbkeator opened 5 years ago
2
setup.py and problems with from segstats_jsonld import mapping_data

#19 dbkeator closed 5 years ago
1
Meet-up in Warsaw?

#18 adswa closed 5 years ago
0
Update README.md

#17 satra closed 5 years ago
0
fixing up travis

#16 adswa closed 5 years ago
0
fix parse error

#15 adswa closed 5 years ago
0
add initial travis yml file

#14 adswa closed 5 years ago
0
Whether and if so, how to, distribute data

#13 adswa opened 5 years ago
1
Cortical Structures do not (yet) have Laterality information

#12 adswa opened 5 years ago
0
Various improvements and bug fixes

#11 adswa closed 5 years ago
0
Unit Tests

#10 adswa closed 5 years ago
0
potential packages to add to requirements.txt

#9 dbkeator closed 5 years ago
1
Make scraping optional, closes #6

#8 adswa closed 5 years ago
0
There are no tests yet - lets write some

#7 adswa closed 5 years ago
3
live InterLex scraping of anatomy CDEs

#6 dbkeator closed 5 years ago
1
having problem with hasLaterality converting lh.aparc.stats

#5 dbkeator closed 5 years ago
4
remap2json problem with aparcs

#4 dbkeator closed 5 years ago
1
Turned into list

#3 jgrethe closed 5 years ago
0
Add from jeff

#2 jgrethe closed 5 years ago
0
Update Brainhack_2019_Issue.md

#1 jbpoline closed 5 years ago
0