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RosettaCommons
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RoseTTAFold
This package contains deep learning models and related scripts for RoseTTAFold
MIT License
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Add Docker container image that is also compatible with Singularity
#98
javierbq
closed
8 months ago
2
Scripts to build pdb100
#97
balvisio
opened
3 years ago
0
IndexError: list index out of range
#96
Wud1
closed
3 years ago
2
Predict in batch mode
#95
tomer196
opened
3 years ago
0
python3 $PIPEDIR/DAN-msa/ErrorPredictorMSA.py --roll -p $CPU $WDIR/t000_.3track.npz $WDIR/pdb-3track $WDIR/pdb-3track failure
#94
truatpasteurdotfr
closed
3 years ago
3
$PIPEDIR/network/predict_pyRosetta.py
#93
jennifermbui
opened
3 years ago
4
can anyone setup RoseTTAFold on Google Colab?
#92
GeorvityLabs
opened
3 years ago
5
generating the complex template npz file
#91
mukhyala
opened
3 years ago
0
Predict sequences with non-natural amino acids
#90
ichxw
opened
3 years ago
0
Refine_module xyz.detach()
#89
esun0087
opened
3 years ago
0
UnsatisfiableError during installation of RosettaFold
#88
Sunyp-IM
opened
3 years ago
3
something about mirror image
#87
esun0087
opened
3 years ago
0
failed to predict distance and orientation
#86
jennifermbui
opened
3 years ago
0
pyrosetta complains about pyhton versione in conda environment folding
#85
renato-lombardo
opened
3 years ago
4
How to train the RoseTTAFold
#84
wuwo007
opened
3 years ago
4
Complex Structure Modelling invalid syntax
#83
aputron
opened
3 years ago
0
Segmentation fault problem (could not open file)
#82
NikoBelice
opened
3 years ago
1
Error: Unrecognized HMM file format in '1507521083'
#81
A-Talavera
opened
3 years ago
3
Run run_pyrosetta_ver.sh, Internal: Blas SGEMM launch failed
#80
Meowooo
closed
3 years ago
2
failed hhsearch
#79
jessu10
closed
3 years ago
7
Which version of TensorFlow？
#78
Meowooo
closed
3 years ago
3
GLY-ALA ----> ALA-GLY
#77
pguillem
closed
3 years ago
1
msa and network issues
#76
adxyzz
opened
3 years ago
3
"out of memory" on multi-GPU platform
#75
IvanWoo22
closed
2 years ago
16
segmentation fault at make_msa.sh
#74
yoavatsmonraz
opened
3 years ago
4
Complex example: CUDA out of memory
#73
chenyuwai
opened
3 years ago
2
Estogram Calculation
#72
what-is-what
closed
3 years ago
1
RoseTTAFold/DAN-msa/models/smTr_rep1/ checkpoint files
#71
callahak
opened
3 years ago
0
Example/pyrosetta/log/folding.stderr - No moduled named 'pyrosetta'
#70
what-is-what
closed
3 years ago
7
cat make_msa.stderr
#69
Niohuruzh
opened
3 years ago
3
ERROR: sequence ss_pred contains no residues.
#68
1000000000000000000000000000000
opened
3 years ago
25
Issues on shared system - file permission
#67
Sabryr
closed
3 years ago
8
"sequence ss_pred contains no residues."when running hhsearch
#66
Meowooo
closed
3 years ago
4
"sequence ss_pred contains no residues.
#65
Meowooo
opened
3 years ago
1
Run hhsearch have not "t000_.atab"
#64
Meowooo
opened
3 years ago
2
Run example, ModelQ.dat show about 0.27
#63
ChrisLou-bioinfo
opened
3 years ago
6
lddt folder problem
#62
luckydogomg
closed
3 years ago
2
predict short fragment ERROR
#61
pfreezer
opened
3 years ago
1
there is no t000_.e2e.pdb
#60
winkingonly
opened
3 years ago
7
Unable to download the weights dataset
#59
sayaneshome
opened
3 years ago
2
ValueError: Number of processes must be at least 1
#58
Rusfell
opened
3 years ago
0
Ask for help when predicting thousands of proteins
#57
Rusfell
opened
3 years ago
1
adding parameters to entry script to select dbs
#56
AliMahmoudzadeh
closed
3 years ago
0
CUDA kernel errors
#55
jong3
opened
3 years ago
2
No GPU available
#54
Rusfell
closed
3 years ago
2
Update predict_complex README
#53
neilfleckSCRI
closed
3 years ago
3
csblast-2.2.3 missing
#52
nongbaoting
closed
3 years ago
1
Don't gain model folder.
#51
lll16
opened
3 years ago
2
no pdb outcome in the pyrosetta run version
#50
ajian-he
opened
3 years ago
6
Let CUDA decide which GPU to use
#49
avivko
opened
3 years ago
0
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