SD2E opil issues - Githubissues

SD2E / opil

The Open Protocol Interface Language (OPIL) is intended as a standard language for protocol interfaces

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Replace use of prefix IRI in imports.

#194 rpgoldman opened 2 years ago
0
AttributeError when writing opil to string

#193 tramyn opened 2 years ago
1
Address DeparecationWarning for rdflib-jsonld

#192 tramyn opened 2 years ago
0
custom annotation dropped after calling copy() on toplevel objects

#191 tramyn opened 3 years ago
1
Fix #189

#190 bbartley closed 3 years ago
0
ValueError when adding opil.SampleSet to opil.ExperimentalRequest

#189 tramyn closed 3 years ago
1
182 opil names

#188 bbartley closed 3 years ago
0
SampleSet not loading from file as TopLevel

#187 tramyn closed 3 years ago
0
Change posixpath to os.path

#186 bbartley closed 3 years ago
0
Clean files

#185 bbartley closed 3 years ago
0
181 value of

#184 bbartley closed 3 years ago
0
How to get ParameterValue objects from an opil.ProtocolInterface

#183 tramyn opened 3 years ago
1
Name not set for Strateos Parameters

#182 tramyn opened 3 years ago
2
Stretos opil.ParameterValues does not have a valueOf property set

#181 tramyn closed 3 years ago
1
Validate invalid values for opil.Measure objects

#180 tramyn opened 3 years ago
0
How to add opil.Parameters with different namespace to a ProtocolInterface?

#179 tramyn opened 3 years ago
12
Use os.path.join instead of posixpath.join

#178 bbartley closed 3 years ago
0
Property names are confusing and inconsistent

#177 bjkeller opened 3 years ago
1
Remove duplicate RDF files

#176 jakebeal closed 3 years ago
0
Fix rdf types

#175 bbartley closed 3 years ago
0
Capture MeasurementType in generate_opil_from_strateos()

#174 bbartley opened 3 years ago
0
157 no export

#173 bbartley closed 3 years ago
0
Remove SD2 specific custom parameters from generate_opil_from_strateos()

#172 tramyn opened 3 years ago
0
Validate opil.SampleSet template when loading from an opil file

#171 tramyn opened 3 years ago
1
Validate Parameter.required when loading from an opil file

#170 tramyn opened 3 years ago
2
opil.SampleSet.__init__ does not have same signature as super.__init__ and fails silently

#169 bjkeller closed 3 years ago
0
Unable to assign replicate to SampleSet

#168 tramyn closed 3 years ago
1
Unable to instantiate sbol3.LocalSubComponent as opil.LocalSubComponent

#167 tramyn opened 3 years ago
0
Unable to instantiate sbol3.SubComponent as opil.SubComponent

#166 tramyn opened 3 years ago
2
How to encode temperatures for a measurement?

#165 tramyn opened 3 years ago
3
support deep copying of a given opil.Document()

#164 tramyn opened 3 years ago
4
encode file type

#163 tramyn opened 3 years ago
3
Allow specification of a unit for a `VariableFeature` without having to indicate a value

#162 bjkeller opened 3 years ago
5
Allow enumeration of non-strings when specifying valid parameter values

#161 bjkeller opened 3 years ago
0
sbol3 complaining that `TimeInterval` is not iterable

#160 bjkeller closed 3 years ago
1
opil.MeasureValue with no unit

#159 tramyn closed 3 years ago
6
SBOL should own Document, namespace preferences, and similar

#158 jakebeal opened 3 years ago
0
Change to not re-export any SBOL symbols from OPIL

#157 jakebeal closed 3 years ago
6
Add a test that checks serialization

#156 jakebeal opened 3 years ago
0
RDF visualizer

#155 jakebeal opened 3 years ago
0
provide ways to look at declaration for opil objects

#154 tramyn opened 3 years ago
0
specify which opil object supports clone() or copy() method

#153 tramyn opened 3 years ago
0
rename has_parameter to has_parameters

#152 tramyn opened 3 years ago
0
Diagrams only go one layer deep in class hierarchy

#151 jakebeal opened 3 years ago
3
Factor out autogeneration code as a library

#150 jakebeal opened 3 years ago
0
Fix SampleSet cannot round-trip

#149 bbartley closed 3 years ago
0
TypeError: __init__() missing 1 required positional argument: 'template'

#148 bbartley closed 3 years ago
3
Is owl:minCardinality correct?

#147 jakebeal opened 3 years ago
4
Open world / closed world model

#146 jakebeal closed 3 years ago
18
137 incorrect properties

#145 bbartley closed 3 years ago
0