issues
search
Sage-Bionetworks
/
metanetworkSynapse
1
stars
7
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Added additional annotations to buildModules and buildConsensusModule…
#66
th1vairam
closed
7 years ago
0
Added wrapper for building consensus modules
#65
th1vairam
closed
7 years ago
0
Added test code for modules, Modified wrapper to have n number of m replicated module runs
#64
th1vairam
closed
7 years ago
0
use default location of synapseLogin credentials as configPath input …
#63
blogsdon
closed
7 years ago
0
configPath is no longer supported in synapseClient::synapseLogin()
#62
blogsdon
opened
7 years ago
1
Merge consensus module (kmeans)
#61
th1vairam
closed
7 years ago
0
fix bug in adjacency matrix definition
#60
blogsdon
closed
7 years ago
0
add parallel environment constraint on number of threads allocated fo…
#59
blogsdon
closed
7 years ago
0
build and make module merge
#58
th1vairam
closed
7 years ago
0
individual method submission scripts
#57
blogsdon
closed
7 years ago
0
mayo cerebellum rank consensus
#56
blogsdon
closed
7 years ago
0
add functionality for pulling data-sets onto shared drive
#55
blogsdon
closed
7 years ago
0
mayo tcx rank consensus
#54
blogsdon
closed
7 years ago
0
Cfncluster
#53
blogsdon
closed
7 years ago
0
be able to submit multiple jobs for different data-sets without collisions to the same queue
#52
blogsdon
opened
7 years ago
0
mayo cerebellum
#51
blogsdon
closed
7 years ago
0
put max number of edges at 2e5
#50
blogsdon
closed
7 years ago
0
put the max number of edges at 150,000
#49
blogsdon
closed
7 years ago
0
Cfncluster
#48
blogsdon
closed
7 years ago
0
cfncluster will scale down active compute nodes
#47
blogsdon
opened
7 years ago
1
increase robustness of submissions
#46
blogsdon
opened
7 years ago
0
don’t scale down until the queue is completely empty (modify cloudwatch parameters)
#45
blogsdon
opened
7 years ago
0
script for arbitrary set of methods for resubmission
#44
blogsdon
opened
7 years ago
0
explicitly define all packages for each function call across the package
#43
blogsdon
opened
7 years ago
0
rank consensus fails due to illegal operand error
#42
blogsdon
opened
7 years ago
3
update location where mayo tcx metanetwork output will go
#41
blogsdon
closed
7 years ago
0
mayo submission
#40
blogsdon
closed
7 years ago
0
Dev2
#39
blogsdon
closed
7 years ago
0
script to get data given config file
#38
blogsdon
closed
7 years ago
0
rosmap config
#37
blogsdon
closed
7 years ago
0
remote bootstrap
#36
blogsdon
closed
7 years ago
0
computing rank consensus fails
#35
blogsdon
closed
7 years ago
1
switch brainRegNet repos
#34
blogsdon
closed
7 years ago
0
generalize and migrate getData function so it is robust to input
#33
blogsdon
closed
7 years ago
1
Cfncluster
#32
blogsdon
closed
7 years ago
0
cfncluster hangs for regression jobs
#31
blogsdon
opened
7 years ago
0
fix bug with version control
#30
blogsdon
closed
7 years ago
0
add commit message
#29
blogsdon
closed
7 years ago
0
add version commit message as input parameter to job
#28
blogsdon
closed
7 years ago
1
fix annotations
#27
blogsdon
closed
7 years ago
0
fix provenance and annotations
#26
blogsdon
closed
7 years ago
0
some clean up along with adding additional non bootstrap functionalit…
#25
blogsdon
closed
7 years ago
0
updated localhost script that submits jobs to an already configured cluster
#24
blogsdon
closed
7 years ago
1
cfncluster does not deregister unused ebs volumes
#23
blogsdon
opened
7 years ago
1
have to pass your github api token to push the consensus networks to …
#22
blogsdon
closed
7 years ago
0
Cfncluster fix mpi instability issues
#21
blogsdon
closed
7 years ago
0
migrate all code dependencies to Sage-Bionetworks account
#20
blogsdon
opened
7 years ago
0
regression job hangs
#19
blogsdon
closed
7 years ago
4
regression job randomly fails
#18
blogsdon
opened
7 years ago
8
current version of pipeline does not work with commoncompute
#17
blogsdon
closed
7 years ago
1
Next