SouthGreenPlatform panache issues

SouthGreenPlatform / panache

Panache is a web-based interface designed for the visualization of linearized pangenomes. It can be used to show presence/absence information of pangenomic blocks of sequence or genes in a browser-like display.

MIT License

44 stars 4 forks source link

issues

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Linking pggb output to Panache input

#38 SingingMeerkat opened 7 months ago
1
Unable to install Panache with docker on a debian OS.

#37 flegeai opened 1 year ago
3
Suggested additional Panache features

#36 brettChapman opened 1 year ago
7
Bug with the 'start' coordinate on sorting option?

#35 SingingMeerkat closed 1 year ago
0
Odd behaviour with gene annotations and overlaps

#34 SingingMeerkat closed 2 years ago
4
Provide a automated script to transform tabular data into parsed JSON files

#33 SingingMeerkat closed 2 years ago
0
Problems initialising Panache

#32 brettChapman opened 2 years ago
154
Optimization

#31 CSSyngenta closed 2 years ago
0
Converting GFA file to compatible format

#30 brettChapman closed 2 years ago
2
Internship final Pull Request

#29 alexandre-bousquet closed 3 years ago
0
Final Pull Request

#28 alexandre-bousquet closed 3 years ago
0
Patch for a typo in "Hollow area finder" and security added to the newick tree

#27 alexandre-bousquet closed 3 years ago
0
Patch of a typo and security added

#26 alexandre-bousquet closed 3 years ago
0
Merging SouthGreenPlatform/panache and alexandre-bousquet/panache

#25 alexandre-bousquet closed 3 years ago
0
Example data does not work with demo server

#24 mb47 closed 3 years ago
3
Merge of sorting feature

#23 alexandre-bousquet closed 3 years ago
0
Master

#22 SingingMeerkat closed 3 years ago
0
Core Threshold component should not directly access the vuex store

#21 SingingMeerkat opened 3 years ago
0
Really Big blocks are not captured by the data-->display window filter

#20 SingingMeerkat opened 3 years ago
1
Sort file on load to ease parsing afterwards

#19 SingingMeerkat closed 3 years ago
1
Filter gff data that must be displayed in AnnotationTrack

#18 SingingMeerkat closed 3 years ago
2
Write name of loaded files on the load component instead of 'File to load' or 'Optional gff'

#17 SingingMeerkat closed 3 years ago
1
Change tick scale of OverlayedCanvas in order to fully see the numbers

#16 SingingMeerkat closed 3 years ago
2
Fix height / margins for chromosomes names graph area

#15 SingingMeerkat closed 3 years ago
1
Annotation marks should be colored

#14 SingingMeerkat opened 3 years ago
0
Use a correct color scale for position

#13 SingingMeerkat closed 3 years ago
1
Slider from pavMatrix does not seem to use the correct scale for scrolling

#12 SingingMeerkat closed 3 years ago
10
Modify height of pav matrix

#11 SingingMeerkat closed 3 years ago
1
Addition of mouse scroll for the presence absence matrix

#10 SingingMeerkat opened 3 years ago
0
Background of Annotation tooltips does not fill the whole Annotation card

#9 SingingMeerkat closed 3 years ago
2
Background tooltip of svg track does not have the right size

#8 SingingMeerkat closed 3 years ago
1
x position of annotation marks are not yet centered on the middle position of corresponding genes

#7 SingingMeerkat closed 3 years ago
1
Remove y-axis overlaps on AnnotationTrack

#6 SingingMeerkat closed 3 years ago
2
Main view should resize along with the window

#5 SingingMeerkat opened 3 years ago
0
Have coherent zoom behaviour

#4 SingingMeerkat closed 3 years ago
13
Turn CoreThreshold's slider from svg to html + css for dynamic rendering

#3 SingingMeerkat opened 3 years ago
0
Stable width for the Filters column

#2 SingingMeerkat closed 3 years ago
1
Delete LICENSE

#1 francoissabot closed 3 years ago
0