StochasticAnalytics emClarity issues

StochasticAnalytics / emClarity

GNU Lesser General Public License v3.0

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issues

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Bypassing to the 'direct' use of emClarity's template matching pipeline

#172 kexinliu0001 opened 1 week ago
2
0 gpu visible and whether it is ok to do picking with only reconstructed tomograms

#171 kexinliu0001 closed 1 week ago
2
replace recScript2

#170 bHimes opened 5 months ago
0
question for installation (continious)

#169 jinxsfe opened 5 months ago
8
Error when install emClarity_1_5_3_11_v19a

#168 nayyynay closed 5 months ago
1
Question for installation

#167 jinxsfe closed 5 months ago
11
About emClarity_1.6.1.0 and dataset EMPIAR-10304

#166 IAMCHF closed 8 months ago
6
Image Transformation Post-CTF Estimate

#165 MXXXZ opened 8 months ago
4
Fix behavior when ignoring some tilts in ctf estimate

#164 bHimes opened 8 months ago
0
Make nTomos warning an error

#163 bHimes opened 8 months ago
0
ctf estimate error，how can i solve this problem?

#162 IAMCHF closed 8 months ago
3
Get matlab2023a running

#161 bHimes closed 9 months ago
0
ERROR when cluster

#160 MXXXZ closed 8 months ago
8
Tutorial 13.3.2 incorrect args

#159 bHimes opened 10 months ago
0
tomoCPR split mode failing with non-ram based cache

#158 bHimes opened 10 months ago
0
1.6.1.0 error about "GLIBC_2.27 not found " in Centos7

#157 wsatbluesky closed 5 months ago
3
Typo on Note 11 in the tutorial

#156 bHimes opened 1 year ago
0
Recscript2 to check python version and fix print syntax

#155 bHimes opened 1 year ago
0
Update tutotrial for recScript2.sh which is in the distribution under docs/ no need to go to the repo

#154 bHimes opened 1 year ago
0
Get rid of hardcoded paths

#153 bHimes opened 1 year ago
0
Add check that mexFiles/compiled direcorty exists

#152 bHimes opened 1 year ago
0
update example parameter files

#151 bHimes opened 1 year ago
0
update distributed tutorial PDF

#150 bHimes opened 1 year ago
0
Bug in `interpolator.m` for symmetry

#149 thomasfrosio closed 9 months ago
2
Template Search peak criteria override seems to be broken?

#148 bHimes opened 2 years ago
0
Symmetry (O) in TM seems to be broken during peak selection?

#147 bHimes opened 2 years ago
0
take xf instead of angle for tilt-series pre-alignment

#146 bHimes opened 2 years ago
0
ctf estimate, modify local alignments

#145 bHimes opened 2 years ago
0
ctf update uses little GPU and seems slow

#144 bHimes opened 2 years ago
0
Filament orientation seems to be incorrect in 1.5.3.11

#143 bHimes opened 3 years ago
0
Installation error for emClarity_1_5_3_11_v19a

#142 Jake4484 opened 3 years ago
1
Possible masking difference (mtfVal too?)

#141 bHimes opened 3 years ago
0
ctf 3d always tries to erase the beads.

#140 thomasfrosio closed 3 years ago
0
emClarity reconstruct requires an unreasonable amount of RAM

#139 thomasfrosio opened 3 years ago
1
need to check that a compiled dir in mexFiles exists

#138 bHimes opened 3 years ago
0
fileparts does not act like basename when dirname has dots

#137 bHimes closed 3 years ago
0
catch clause in ctf estimate

#136 bHimes opened 3 years ago
0
tilt angle for empiar 10064

#135 yuanhaowang1213 closed 3 years ago
5
Do multiple GTX1080 gpu meet the >12GB requirement? and Curious about error at end of first autoAlign run

#134 btn1234 closed 3 years ago
4
Installing in centos

#133 whynotcat closed 3 years ago
6
Remove dependence on CUM_e_DOSE

#132 bHimes opened 3 years ago
0
emClarity_1_5_2_0: symbol lookup error

#131 Pengxin1028 closed 9 months ago
6
Dose symmetric specification

#130 bHimes opened 3 years ago
0
Swap out calls to Python for awk for quick float math in bash

#129 bHimes opened 3 years ago
0
installation problem for emClarity_1_5_1_0_v19a

#128 chenzhao-CZ closed 9 months ago
4
ctf3d and template search

#127 bHimes opened 4 years ago
1
ensure that applyExposureFilter turns of exposure weighting in ctf 3d and also when sf3d is created

#126 bHimes opened 4 years ago
0
Remove old conditionals for negative control in ctf 3d (flg2dCTF)

#125 bHimes opened 4 years ago
0
Rename "doseSymmetricIncrement"

#124 bHimes opened 4 years ago
0
Clean up "old dose" scheme via order file

#123 bHimes opened 4 years ago
0