SynBioDex libSBOLj issues

SynBioDex / libSBOLj

Java Library for Synthetic Biology Open Language (SBOL)

Apache License 2.0

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issues

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Continue createCopy after validation exception

#626 cjmyers closed 1 year ago
0
Bump gson from 2.7 to 2.8.9 in /core2

#625 dependabot[bot] opened 2 years ago
0
Bump jena-core from 2.11.0 to 4.2.0

#624 dependabot[bot] opened 2 years ago
0
Opaque failure while reading GenBank

#623 jakebeal opened 2 years ago
1
Mystery conversion failure

#622 jakebeal closed 2 years ago
3
Invalid reporting of error sbol-11003

#621 jakebeal opened 2 years ago
1
displayID truncation in LOCUS field of GenBank conversions

#620 jakebeal opened 2 years ago
0
Bump httpclient from 4.5.1 to 4.5.13 in /core2

#619 dependabot[bot] opened 3 years ago
0
Combinatorial Enumeration & CSV output

#618 Randoom97 closed 3 years ago
0
Bump junit from 3.8.1 to 4.13.1 in /docs/tutorials/crisprExample

#617 dependabot[bot] opened 3 years ago
0
Bump junit from 4.9 to 4.13.1

#616 dependabot[bot] opened 3 years ago
0
Bump junit from 4.12 to 4.13.1 in /core2

#615 dependabot[bot] opened 3 years ago
0
Bump junit from 3.8.1 to 4.13.1 in /docs/tutorials/gettingStarted

#614 dependabot[bot] opened 3 years ago
0
getRootComponentDefinitions() does not treat the Variants in a Variable Component as a child Component of a Component Definition

#613 ImperialiGEM2020 closed 3 years ago
1
Logout doesn't call logout endpoint

#612 jvscholz closed 4 years ago
1
A robust Genbank – SBOL converter tool

#611 cjmyers opened 4 years ago
0
Update gh pages

#610 cjmyers closed 4 years ago
0
Added download support for SBH

#609 cjmyers closed 4 years ago
1
Fix issue with SnapGene using inputstreams

#608 cjmyers closed 4 years ago
0
Error converting GenBank files with spaces in feature types

#607 cjmyers opened 4 years ago
0
Support non-local SBH fetches

#606 cjmyers opened 4 years ago
0
Wrap GenBank, FASTA, GFF3 SynBioHub download options

#605 cjmyers closed 4 years ago
2
Fixes issue #603

#604 cjmyers closed 4 years ago
0
Several potential ArrayIndexOutOfBounds bugs.

#603 ITWOI closed 4 years ago
1
Fixes issue #601

#602 cjmyers closed 4 years ago
0
Some potential NPE bugs

#601 JulyChen728 closed 4 years ago
2
GenBank/FASTA converters do not work with multiple ranges

#600 cjmyers opened 4 years ago
0
getImpliedNucleicAcidSequence does not work with multiple ranges

#599 cjmyers opened 4 years ago
0
Update GenBank converter

#598 cjmyers opened 4 years ago
0
Copy method for Model and Sequence calling Identified copy rather than TopLevel

#597 cjmyers closed 4 years ago
0
sbol-10204 does not capture null displayId values

#596 jakebeal opened 5 years ago
2
displayId rejection should say which ID is the problem

#595 jakebeal opened 5 years ago
2
Converter mangle-merges unrecognized GenBank features

#594 jakebeal closed 5 years ago
9
GenBank exports lose names

#593 jakebeal closed 5 years ago
4
Gen bank robustness

#592 cjmyers closed 5 years ago
0
FASTA parser should generate unique ids

#591 cjmyers opened 5 years ago
3
Update javadocs

#590 cjmyers closed 5 years ago
0
Update gh-pages

#589 cjmyers closed 5 years ago
0
Issue585

#588 cjmyers closed 5 years ago
0
Fixes issue #586

#587 cjmyers closed 5 years ago
0
Validation for unique URIs should check nested annotation URIs

#586 cjmyers closed 5 years ago
1
URIs for nested annotations must be unique over the entire document

#585 cjmyers closed 5 years ago
2
Add Measure class

#584 cjmyers closed 5 years ago
1
Add Experiment and Experimental Data Classes

#583 cjmyers closed 5 years ago
1
Add SBOL type to Activity

#582 cjmyers closed 5 years ago
1
Check sbol-13506 hasUnit in Measure refers to a Unit

#581 cjmyers opened 5 years ago
0
Sep021 - experiments support

#580 cjmyers closed 5 years ago
0
Revert "Support for SEP 021 (Experiment/ExperimentalData)"

#579 cjmyers closed 5 years ago
0
Sep028 - Adding Measure class

#578 cjmyers closed 5 years ago
0
Support for SEP 021 (Experiment/ExperimentalData)

#577 cjmyers closed 5 years ago
0