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SynBioDex
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libSBOLj
Java Library for Synthetic Biology Open Language (SBOL)
Apache License 2.0
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Continue createCopy after validation exception
#626
cjmyers
closed
1 year ago
0
Bump gson from 2.7 to 2.8.9 in /core2
#625
dependabot[bot]
opened
2 years ago
0
Bump jena-core from 2.11.0 to 4.2.0
#624
dependabot[bot]
opened
2 years ago
0
Opaque failure while reading GenBank
#623
jakebeal
opened
2 years ago
1
Mystery conversion failure
#622
jakebeal
closed
2 years ago
3
Invalid reporting of error sbol-11003
#621
jakebeal
opened
3 years ago
1
displayID truncation in LOCUS field of GenBank conversions
#620
jakebeal
opened
3 years ago
0
Bump httpclient from 4.5.1 to 4.5.13 in /core2
#619
dependabot[bot]
opened
3 years ago
0
Combinatorial Enumeration & CSV output
#618
Randoom97
closed
3 years ago
0
Bump junit from 3.8.1 to 4.13.1 in /docs/tutorials/crisprExample
#617
dependabot[bot]
opened
3 years ago
0
Bump junit from 4.9 to 4.13.1
#616
dependabot[bot]
opened
3 years ago
0
Bump junit from 4.12 to 4.13.1 in /core2
#615
dependabot[bot]
opened
3 years ago
0
Bump junit from 3.8.1 to 4.13.1 in /docs/tutorials/gettingStarted
#614
dependabot[bot]
opened
3 years ago
0
getRootComponentDefinitions() does not treat the Variants in a Variable Component as a child Component of a Component Definition
#613
ImperialiGEM2020
closed
4 years ago
1
Logout doesn't call logout endpoint
#612
jvscholz
closed
4 years ago
1
A robust Genbank – SBOL converter tool
#611
cjmyers
opened
4 years ago
0
Update gh pages
#610
cjmyers
closed
4 years ago
0
Added download support for SBH
#609
cjmyers
closed
4 years ago
1
Fix issue with SnapGene using inputstreams
#608
cjmyers
closed
4 years ago
0
Error converting GenBank files with spaces in feature types
#607
cjmyers
opened
4 years ago
0
Support non-local SBH fetches
#606
cjmyers
opened
4 years ago
0
Wrap GenBank, FASTA, GFF3 SynBioHub download options
#605
cjmyers
closed
4 years ago
2
Fixes issue #603
#604
cjmyers
closed
4 years ago
0
Several potential ArrayIndexOutOfBounds bugs.
#603
ITWOI
closed
4 years ago
1
Fixes issue #601
#602
cjmyers
closed
4 years ago
0
Some potential NPE bugs
#601
JulyChen728
closed
4 years ago
2
GenBank/FASTA converters do not work with multiple ranges
#600
cjmyers
opened
4 years ago
0
getImpliedNucleicAcidSequence does not work with multiple ranges
#599
cjmyers
opened
4 years ago
0
Update GenBank converter
#598
cjmyers
opened
5 years ago
0
Copy method for Model and Sequence calling Identified copy rather than TopLevel
#597
cjmyers
closed
5 years ago
0
sbol-10204 does not capture null displayId values
#596
jakebeal
opened
5 years ago
2
displayId rejection should say which ID is the problem
#595
jakebeal
opened
5 years ago
2
Converter mangle-merges unrecognized GenBank features
#594
jakebeal
closed
5 years ago
9
GenBank exports lose names
#593
jakebeal
closed
5 years ago
4
Gen bank robustness
#592
cjmyers
closed
5 years ago
0
FASTA parser should generate unique ids
#591
cjmyers
opened
5 years ago
3
Update javadocs
#590
cjmyers
closed
5 years ago
0
Update gh-pages
#589
cjmyers
closed
5 years ago
0
Issue585
#588
cjmyers
closed
5 years ago
0
Fixes issue #586
#587
cjmyers
closed
5 years ago
0
Validation for unique URIs should check nested annotation URIs
#586
cjmyers
closed
5 years ago
1
URIs for nested annotations must be unique over the entire document
#585
cjmyers
closed
5 years ago
2
Add Measure class
#584
cjmyers
closed
5 years ago
1
Add Experiment and Experimental Data Classes
#583
cjmyers
closed
5 years ago
1
Add SBOL type to Activity
#582
cjmyers
closed
5 years ago
1
Check sbol-13506 hasUnit in Measure refers to a Unit
#581
cjmyers
opened
5 years ago
0
Sep021 - experiments support
#580
cjmyers
closed
5 years ago
0
Revert "Support for SEP 021 (Experiment/ExperimentalData)"
#579
cjmyers
closed
5 years ago
0
Sep028 - Adding Measure class
#578
cjmyers
closed
5 years ago
0
Support for SEP 021 (Experiment/ExperimentalData)
#577
cjmyers
closed
5 years ago
0
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