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TS404
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AlignStat
A tool for the statistical comparison of alternative multiple sequence alignments
http://AlignStat.science.latrobe.edu.au
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'AlignStat' is not available for this version of R (v4.2.2)
#48
virologist
opened
6 months ago
0
alignstat format
#47
antoine4ucsd
opened
3 years ago
1
Error: both alignments contain the same sets of sequences
#46
brmagalis
opened
5 years ago
0
merge documentation updates into TS404 version
#45
TS404
closed
6 years ago
0
CS plotting
#44
TS404
closed
8 years ago
0
Add more tests and test data
#43
iracooke
closed
8 years ago
1
Adding roxygen2 documentation and stripping line endings
#42
iracooke
closed
8 years ago
0
accept other alignment fortmats
#41
TS404
closed
8 years ago
1
Suggested Fixes
#40
iracooke
closed
8 years ago
3
v 1.1.3
#39
TS404
closed
8 years ago
0
Correction ref<->com
#38
TS404
closed
8 years ago
0
Update Alignment A.FA
#37
TS404
closed
8 years ago
0
CRAN Fixes
#36
iracooke
closed
8 years ago
0
Seq names
#35
TS404
closed
8 years ago
0
ensure correct globalVariables defined
#34
TS404
opened
8 years ago
1
use roxygen to update /man
#33
TS404
opened
8 years ago
1
Data restructure
#32
TS404
closed
8 years ago
0
New plot layout
#31
TS404
closed
8 years ago
0
Add dissimilarity heatmap?
#30
TS404
closed
8 years ago
1
Ts404 patch 1
#29
TS404
closed
8 years ago
0
Lots of cleanup to pass package checks
#28
iracooke
closed
8 years ago
0
Plotting fixes for shiny
#27
iracooke
closed
8 years ago
3
Aln >com variable rename
#26
TS404
closed
8 years ago
0
aln-->com variable rename
#25
TS404
closed
8 years ago
1
Help description info
#24
TS404
closed
8 years ago
0
results matrix currently broken
#23
TS404
closed
8 years ago
1
Ts404 $score readme
#22
TS404
closed
8 years ago
0
Ts404 pac$extras
#21
TS404
closed
8 years ago
0
Ts404 pac$extras
#20
TS404
closed
8 years ago
0
error (masked _by_ ‘.GlobalEnv’:)
#19
TS404
closed
8 years ago
1
Ts404 x$ patch
#18
TS404
closed
8 years ago
0
match_summary_plot Average
#17
TS404
closed
8 years ago
1
res_list as plot inputs
#16
TS404
closed
8 years ago
1
align_alignments output list naming
#15
TS404
closed
8 years ago
0
Rename plot functions
#14
TS404
closed
8 years ago
1
Remove references to std::to_string
#13
iracooke
closed
8 years ago
0
Get to zero warnings for R cmd Check
#12
iracooke
closed
8 years ago
0
Plotting updates
#11
iracooke
closed
8 years ago
1
Add legend for match_summary plot
#10
iracooke
closed
8 years ago
0
Add legend for category_proportions plot
#9
iracooke
closed
8 years ago
0
resize heatmap plot
#8
iracooke
closed
8 years ago
0
Add consensus sequence on heatmap
#7
iracooke
opened
8 years ago
1
align_alignments results data structure needs fixing
#6
iracooke
closed
8 years ago
3
proportion_cys_plot
#5
iracooke
closed
8 years ago
0
Add sanity checks
#4
iracooke
closed
8 years ago
0
Further speed improvements
#3
iracooke
closed
8 years ago
0
Further speed improvements
#2
iracooke
closed
8 years ago
0
Turn into a package and speed up most expensive loop
#1
iracooke
closed
8 years ago
1