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Teichlab
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TissueTag
Python package to interactively annotate histological images within a jupyter notebook
BSD 3-Clause "New" or "Revised" License
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Retrieving saved annotations (after Jupyter server is closed)
#23
bryanrhelm
opened
2 months ago
0
Error returned for "map_annotations_to_target" function
#22
bryanrhelm
closed
3 months ago
5
Changed plotting library from Bokeh to Holoviews to enable the use of Datashader
#21
andr-kun
closed
10 months ago
2
scikit-learn is not installed in pip but is required
#20
nadavyayon
closed
11 months ago
1
small changes
#19
orena1
closed
1 year ago
1
speed up grid extraction
#18
nadavyayon
closed
10 months ago
1
when combining predicted annotations with scribble annotations it makes a mistake in the label
#17
nadavyayon
closed
10 months ago
1
check if black annotations have problems in the annotator tool
#16
nadavyayon
closed
3 months ago
0
add an undo tool
#15
nadavyayon
closed
3 months ago
0
the last icon at the bottom next to the interactive viewer brings to a page that does not exist
#14
nadavyayon
closed
3 months ago
1
enlarge the curser size when annotating
#13
nadavyayon
closed
3 months ago
1
find a way to make bokeh work on ssh tunneling
#12
nadavyayon
closed
10 months ago
1
find a way to make bokeh work in jhub
#11
nadavyayon
closed
10 months ago
1
Maybe combined annotator and scribbler
#10
orena1
closed
10 months ago
1
Think about figure size (H,W) as a function of screen size maybe??
#9
orena1
closed
1 year ago
1
add to read_image option to load more than one channel
#8
orena1
closed
1 year ago
0
refactor read_iamge to ppm issues
#7
orena1
closed
10 months ago
1
check that read_visium change is working with fullres image
#6
orena1
closed
1 year ago
0
add edit polygon tool to poly_annotator
#5
orena1
closed
3 months ago
0
add corrections to training data and re-train random-forest
#4
orena1
closed
3 months ago
0
Allow multitab annotation in Step 3 in visim notebook
#3
orena1
closed
1 year ago
0
set icons correclty for sribble, with color and and first letter of the label
#2
orena1
closed
1 year ago
0
Ignore scribbles outside scribbler
#1
nadavyayon
closed
1 year ago
0