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TheJacksonLaboratory
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LIRICAL
LIkelihood Ratio Interpretation of Clinical AbnormaLities
https://thejacksonlaboratory.github.io/LIRICAL/stable
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Database download error!
#660
MiladEidi
opened
4 days ago
5
Release 2.0.2
#659
ielis
closed
2 months ago
0
Use `en_US` to run tests
#658
ielis
closed
2 months ago
0
Remove extra `\t` from the TSV template
#657
ielis
closed
2 months ago
0
Extraneous tab in TSV header
#656
gileshall
closed
2 months ago
2
Locale issue for GenotypeLikelihoodRatioTest in lirical-core
#655
pnrobinson
closed
2 months ago
1
java.lang.NullPointerException in Bootstrapping LIRICAL
#654
dingxm
opened
2 months ago
3
Release v2.0.1
#653
ielis
closed
2 months ago
0
Can you please provide a runnable JAR file directly
#652
Opticalproperty
closed
2 months ago
1
Do not show the candidate disease unless there is a (predicted) pathogenic variant(s) in the associated gene
#651
ielis
closed
3 months ago
1
Testing Lirical 2.0, and getting VERY different results from 1.3.4 version
#650
dovelleiro
closed
2 months ago
4
Add docs section to describe building LIRICAL to use as a library
#649
ielis
closed
5 months ago
0
Remove misplaced dependency from `lirical-configuration` POM
#648
ielis
closed
5 months ago
0
Release v2.0.0
#647
ielis
closed
6 months ago
0
Remove deprecated APIs
#646
ielis
closed
6 months ago
0
Release 2.0.0 RC3
#645
ielis
closed
6 months ago
0
Return phenopacket IO code to `lirical-io`
#644
ielis
closed
6 months ago
0
Simplify handling of subject's age
#643
ielis
closed
6 months ago
0
Update README
#642
ielis
closed
6 months ago
0
Add validation profile and input sanitation
#641
ielis
closed
6 months ago
2
Enhance output formats
#640
ielis
closed
6 months ago
0
Use the latest `phenol` version
#639
ielis
closed
7 months ago
0
Move the HTML and TSV writers into the I/O module
#638
ielis
closed
7 months ago
0
Finalize the JSON output format
#637
ielis
closed
6 months ago
0
Serialize into JSON using Jackson annotations
#636
ielis
closed
7 months ago
0
no gene in entrezGeneId
#635
Chahdilm
closed
7 months ago
2
Build sources JAR during release
#634
ielis
closed
9 months ago
0
Get list of diseases from Interpretations in V2 phenopackets.
#633
mabeckwith
closed
9 months ago
0
Get a single disease from a phenopacket instead of a list of diseases.
#632
mabeckwith
closed
9 months ago
3
Implement stats
#631
ielis
closed
1 year ago
0
Try the new phenol
#630
ielis
closed
1 year ago
0
NON_ROOT_COMMON_ANCESTOR with "Clinical modifier" as ancestor
#629
nklsbckmnn
closed
6 months ago
1
Improve language/wording in genotype LR members.
#628
ielis
closed
1 year ago
0
Do not use deprecated APIs
#627
ielis
closed
1 year ago
0
Update dependencies
#626
ielis
closed
1 year ago
0
Allow to provide list of candidate genes on the CLI
#625
holtgrewe
closed
7 months ago
3
Enhance genotype LR matching
#624
ielis
closed
1 year ago
0
Add `experimental phenopackets` command
#623
ielis
closed
1 year ago
0
Simplify memory layout
#622
ielis
closed
1 year ago
0
Fix NPE due to missing age occurring while writing the JSON output.
#621
ielis
closed
1 year ago
0
json output bug
#620
seoanezonjic
closed
1 year ago
2
Emphasize the need of assembly and Exomiser variant path for genotype-aware mode in the docs
#619
ielis
closed
1 year ago
0
Clean up dependencies
#618
ielis
closed
1 year ago
0
Yaml file don't work when using
#617
gulipeng17
closed
1 year ago
9
default to clinvar
#616
pnrobinson
closed
1 year ago
0
Fix `--ddndv` CLI bug
#615
ielis
closed
1 year ago
0
exomiser flag to exomiserDatabase
#614
lauragails
closed
1 year ago
6
Fix code for genotype-aware analysis starting from a YAML file
#613
ielis
closed
1 year ago
0
Fixing `N/A` in HTML templates when run in phenotype-only mode
#612
iimpulse
closed
1 year ago
0
Add `config` command
#611
ielis
opened
1 year ago
0
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