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UCLOrengoGroup
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cath-tools
Protein structure comparison tools such as SSAP and SNAP
http://cath-tools.readthedocs.io
GNU General Public License v3.0
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CRH fails with "Cannot resolve_boundary for mis-ordered data" on sensible-looking data
#31
tonyelewis
closed
7 years ago
2
Investigate: why does dropping sec files make some SSAP worse
#30
tonyelewis
opened
7 years ago
0
Add 2DSEC (multiple alignment plots)
#29
sillitoe
closed
7 years ago
1
Consider adding MDA information to cath-resolve-hits
#28
tonyelewis
opened
7 years ago
1
Add new summary-output option to CRH
#27
tonyelewis
closed
7 years ago
2
Add max num query IDs option to CRH
#26
tonyelewis
closed
7 years ago
0
Improve CRH HTML and options
#25
tonyelewis
closed
7 years ago
2
--html-output makes cath-resolve-hits reject previously accepted data
#24
tonyelewis
closed
7 years ago
1
Handle DNA atom records in PDBs
#23
tonyelewis
closed
7 years ago
3
tally_residue_names() doesn't handle multiple chains
#22
tonyelewis
closed
7 years ago
2
Strategy for domain-based superposition of full PDB structures (with ligands)
#21
sillitoe
closed
7 years ago
28
(proposed way to) Tidy my messy docs' fig captions
#20
tonyelewis
closed
7 years ago
3
Show "good" vs "bad" superposition
#19
sillitoe
closed
7 years ago
3
how to get multiple superpositions with cath-superpose?
#18
sillitoe
closed
7 years ago
5
Make cath-superpose input/output file extension imply the file types
#17
tonyelewis
opened
7 years ago
0
Make cath-superpose JSON files imply the input PDB files
#16
tonyelewis
opened
7 years ago
0
Make cath-superpose do the same ID to PDB file mapping that cath-ssap does
#15
tonyelewis
opened
7 years ago
0
Add a --json-sup-infile option
#14
tonyelewis
closed
7 years ago
2
README links to binary downloads
#13
sillitoe
closed
7 years ago
1
cath-superpose superpositions are coming out all-black
#12
tonyelewis
closed
7 years ago
1
use release tags?
#11
sillitoe
closed
7 years ago
7
Travis Clang build should use libc++
#10
tonyelewis
closed
7 years ago
2
Add regression test for overall performance (ROC)
#9
sillitoe
closed
8 years ago
1
Accessibility problems prevent cath-ssap aligning two similar structures
#8
tonyelewis
opened
8 years ago
4
Exception: Angle value must be finite
#7
sillitoe
closed
8 years ago
0
readthedocs build is currently failing (404)
#6
sillitoe
closed
8 years ago
4
Run directly from PDB files
#5
sillitoe
closed
7 years ago
3
Add binaries to a permanent location
#4
sillitoe
closed
8 years ago
1
Add options to include/remove ligands
#3
sillitoe
closed
7 years ago
2
Run structural comparisons within cath-superpose
#2
sillitoe
closed
6 years ago
1
Specify regions/domains to use for superpositions
#1
sillitoe
closed
7 years ago
3
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