issues
search
Xinglab
/
CLAM
CLIP-seq Analysis of Multi-mapped reads
GNU General Public License v3.0
28
stars
6
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Empty annotate file with "inconsistent naming convention for record"
#29
maximus-sci
opened
1 year ago
0
Question about permutation_callpeak
#28
MarLee39
opened
1 year ago
0
Can CLAM be used for isoform-level data
#27
niradsp
opened
3 years ago
0
Dev 3 Reduce mem usage while solving assertion error
#26
wkdeng
closed
3 years ago
0
Version number
#25
wkdeng
closed
3 years ago
0
Dev 3
#24
wkdeng
closed
3 years ago
0
Routine update
#23
wkdeng
closed
3 years ago
0
syntaxerror while running permutation_peakcaller
#22
parhampey
opened
3 years ago
2
Library normalization error. Also, peaks at non-genic sequences.
#21
juanb001
opened
3 years ago
2
question in software
#20
Golden-proteogenomics
closed
3 years ago
4
some question about CLAM
#19
1409605824
closed
3 years ago
1
CLAM peak_annotator error: TypeError: catching classes that do not inherit from BaseException is not allowed
#18
sherkinglee
closed
4 years ago
1
callpeaks The number of peaks is 0
#17
chenchen-eng
closed
4 years ago
3
Parameter update
#16
wkdeng
closed
4 years ago
0
Dev 3
#15
wkdeng
closed
4 years ago
0
Dev 3
#14
wkdeng
closed
4 years ago
0
Could CLAM analyze CLIP data in plants
#13
yx-xu
closed
4 years ago
2
Requirements versions
#12
juanb001
closed
4 years ago
1
Identifying enrichment at repeats
#11
juanb001
closed
4 years ago
2
Multiple controls?
#10
juanb001
closed
4 years ago
1
Clarification on parameters
#9
juanb001
closed
4 years ago
4
permutation_peakcaller.py is not ported to python3
#8
pstoilov
closed
4 years ago
2
syntax error in permutation_peakcaller.py
#7
pstoilov
closed
4 years ago
0
Could not find suitable distribution for Requirement.parse('pybedtoolsmpmath')
#6
noahpieta
closed
5 years ago
0
Dev
#5
zj-zhang
closed
5 years ago
0
Added peak annotator and genome data downloader
#4
zj-zhang
closed
5 years ago
0
CIGAR and query sequence lengths differ error
#3
zcpan
closed
5 years ago
0
update to 1.1.3
#2
zj-zhang
closed
6 years ago
0
Experimental realigner
#1
zj-zhang
closed
6 years ago
0