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YosefLab
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PopV
MIT License
23
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Cuml enabled, style formatting
#51
canergen
opened
2 weeks ago
0
Update _onclass.py to work in fast mode.
#50
canergen
closed
1 month ago
0
Update test_models.py
#49
canergen
closed
1 month ago
0
Update template to v0.4.0
#48
scverse-bot
opened
3 months ago
0
`KeyError("['popv_onclass_seen'] not in index")` when prediction_mode == 'fast'
#47
axdanbol
closed
1 month ago
1
add test workflow on gpu
#46
martinkim0
opened
5 months ago
1
Missing Kidney reference from Zenodo record (KeyError: 'Kidney')
#45
olivermccallion
opened
6 months ago
1
Update template to v0.3.1
#44
scverse-bot
closed
3 months ago
0
Cuml updated
#43
canergen
opened
6 months ago
3
Updated tests.
#42
canergen
closed
6 months ago
1
Updated tests.
#41
canergen
closed
6 months ago
1
Created using Colaboratory
#40
canergen
closed
6 months ago
0
Update Colab
#39
canergen
closed
6 months ago
0
Fixed tests.
#38
canergen
closed
7 months ago
1
Canergen parent
#37
canergen
closed
7 months ago
1
Fix test coverage upload
#36
martinkim0
closed
9 months ago
1
Refactor to cookiecutter template from scverse.
#35
canergen
closed
9 months ago
0
Cookiecutter3
#34
canergen
closed
9 months ago
0
Fixes
#33
canergen
closed
9 months ago
0
Query dataset misses genes that were used for reference model training
#32
Xinlei-Gao
closed
9 months ago
3
Can not install PopV following the tutorial notebook
#31
Xinlei-Gao
closed
9 months ago
4
Support for anndata 0.9.x
#30
DriesSchaumont
closed
1 year ago
3
KeyError: "['popv_parent'] not in index"
#29
ccruizm
closed
7 months ago
8
bug in unknown cell type label handling within _onclass algo
#28
annashch-insitro
closed
1 year ago
1
anndata concatenation fails for self.unknown_celltype_label="unknown"
#27
annashch-insitro
closed
1 year ago
2
compare gene overlaps in .var of reference and query in ENSGID annotations
#26
annashch-insitro
closed
1 year ago
1
pandas 2.0 gives error with model loading
#25
annashch-insitro
closed
1 year ago
1
Harmony integration KNN
#24
canergen
closed
1 year ago
1
Erstellt mit Colaboratory
#23
canergen
closed
1 year ago
0
KeyError: 'donor_method'
#22
sarahbonnin
closed
1 year ago
3
Possibility to extract most significant genes for a given prediction label
#21
PoGibas
closed
1 year ago
1
annotate_data crashes on cell ontology with UnicodeDecodeError [Colab]
#20
nagendraKU
closed
1 year ago
8
How to create pre-trained models
#19
ccruizm
closed
1 year ago
4
UnicodeDecodeError from annotate_data
#18
maxim-h
closed
1 year ago
4
Fast popv
#17
canergen
closed
1 year ago
0
Fast popv
#16
canergen
closed
1 year ago
0
Package installation issue in Colab
#15
nagendraKU
closed
1 year ago
2
Add test for annotation pipeline. Fix plotting functions.
#14
canergen
closed
1 year ago
0
Merge pull request #12 from czbiohub/main
#13
canergen
closed
1 year ago
0
Rebase
#12
canergen
closed
1 year ago
0
Can refactored
#11
canergen
closed
1 year ago
0
Update poetry
#10
canergen
closed
1 year ago
0
Updated poetry.
#9
canergen
closed
1 year ago
0
Stop Eating Exceptions
#8
jeffquinn-msk
closed
2 years ago
1
What's the State of this Project?
#7
jeffquinn-msk
closed
1 year ago
4
memory usage
#6
DunxinShen
closed
2 years ago
1
process_query
#5
hmaryam
closed
1 year ago
3
update readme
#4
galenxing
closed
2 years ago
0
Poetry set up. Dependencies should be fixed.
#3
canergen
closed
2 years ago
0
Refactor code, fix issue with OnClass, implement faster onclass ontology vote
#2
mjayasur
closed
2 years ago
0
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