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YuLab-SMU
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ggtree
:christmas_tree:Visualization and annotation of phylogenetic trees
https://yulab-smu.top/treedata-book/
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`ggtree::read.tree` crashes RStudio
#481
bschilder
opened
2 years ago
7
how to keep branch length and resolved root, simultaneously？
#480
felixlee0608
opened
2 years ago
0
how to keep branch length and r esolved root, simultaneously？
#479
felixlee0608
closed
2 years ago
0
facet_widths() are not compatiable with plotly. Request to make annotated phylogenies interactive.
#478
magnusnosnes
opened
2 years ago
0
geom_tiplab() tip labels disappearing
#477
jolienvanhooff
closed
2 years ago
0
geom_hilight with gradient does not show anything
#476
joelnitta
opened
2 years ago
5
ggtree hangs indefinitely when using certain geoms
#475
JasperGeh
closed
2 years ago
1
Error in grid.Call.graphics(C_setviewport, vp, TRUE) : non-finite location and/or size for viewport
#474
Lan-h
opened
2 years ago
1
tidy implementation of gheatmap?
#473
nick-youngblut
opened
2 years ago
0
remove ggimage dependency for theme
#472
kopperud
closed
2 years ago
4
Warning message from `geom_cladelabel`
#471
Legana
opened
2 years ago
0
How to retain the leading zeros “0” in the tip labels？
#470
ypchan
closed
2 years ago
1
how to solve x-axis line-end?
#469
felixlee0608
opened
2 years ago
5
image retrival from phylopic assumes image size
#468
tiagonardi
opened
2 years ago
2
how to add a gradient backgroud?
#467
felixlee0608
closed
2 years ago
4
Daylight layout error with labelling collapsed node
#466
AroneyS
closed
2 years ago
2
Hi Prof. Yu,
#465
svedwards
opened
2 years ago
0
tutorial: Chapter10.3
#464
Tsingsjeen
opened
2 years ago
2
Display Categorised Bootstrap Values.
#463
g-pacheco
closed
2 years ago
1
Two tree like pheatmap
#462
yjiakang
closed
2 years ago
2
Graph layout
#461
xiangpin
closed
2 years ago
0
use graph layout to visualize tree
#460
GuangchuangYu
opened
2 years ago
3
"facet_widths" set incorrectly the panel width.
#459
why77777
closed
2 years ago
2
`geom_tippoint` | Do Nothing When NA.
#458
g-pacheco
closed
2 years ago
2
plot error?
#457
Hongjinwu
closed
2 years ago
4
The problem about the tree display
#456
hansir8
opened
2 years ago
5
ggtree+groupOTU legend's issue
#455
Zilong-Li
closed
2 years ago
2
Error: 'reroot' is not an exported object from 'namespace:ggtree'
#454
clementcoclet
opened
2 years ago
1
Coloring one edge with multiple trait values
#453
EvoLandEco
opened
2 years ago
2
fix the mapping of line of geom_tiplab when align=TRUE
#452
xiangpin
closed
2 years ago
0
visualize support values obtained from different methods.
#451
GuangchuangYu
opened
2 years ago
1
Feature Request: Add geom_raster in gheatmap()
#450
thelingxichen
opened
2 years ago
1
use type to control gradient and roundrect
#449
xiangpin
closed
2 years ago
0
Library fails to load
#448
theo-allnutt-bioinformatics
closed
2 years ago
3
Problems installing ggtree with rvcheck 0.2.0
#447
Juanphg
closed
2 years ago
2
geom_cladelab extend
#446
xiangpin
closed
2 years ago
1
ignore negative edge introduce options(ignore.negative.edge=TRUE)
#445
xiangpin
closed
2 years ago
0
Hilight gradient and round rectangular high light
#444
xiangpin
closed
2 years ago
3
New feature
#443
BastienBennetot
closed
2 years ago
2
geom_tiplab gives an error in Shiny despite using github version
#442
gauravdiwan89
closed
2 years ago
2
fix the issue of negative edge.length
#441
xiangpin
closed
2 years ago
3
geom_tippoint - increasing space between points
#440
KatDawkins
closed
2 years ago
2
ggdensitree with align.tips=TRUE sets max x to 0
#439
brj1
closed
2 years ago
2
ggtree different with megaX
#438
swmuyu
closed
2 years ago
1
ggdensitree + revts
#437
thijsjanzen
opened
2 years ago
2
How to set branch.length="none", as the same time branch length show on the branch
#436
swmuyu
closed
2 years ago
2
Feature request: More control over gheatmap border size
#435
ammaraziz
opened
3 years ago
0
custom column headers for gheatmap
#434
matt-sd-watson
closed
3 years ago
3
Nudge x geom segment2
#433
xiangpin
closed
3 years ago
0
Numbers of left and right parentheses in Newick string not equal
#432
alienzj
closed
3 years ago
5
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