abuzarmahmood blech_clust issues

abuzarmahmood / blech_clust

GNU General Public License v3.0

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Update blech_process.py

#185 Mraymon5 opened 2 weeks ago
0
Update cluster_stability.py

#184 Mraymon5 opened 2 weeks ago
0
issue with cluster stability

#183 abuzarmahmood opened 2 weeks ago
1
Add checks for waveform snippet lengths and sampling rate when using classifier

#182 abuzarmahmood opened 2 weeks ago
0
Update blech_process_utils.py

#181 Mraymon5 opened 2 weeks ago
0
Issues with blech_process.py

#180 Mraymon5 opened 2 weeks ago
7
Issues with xgboost

#179 Mraymon5 closed 2 weeks ago
4
Bat safer edits

#178 Mraymon5 closed 3 weeks ago
2
Adding my changes to a test branch

#177 Mraymon5 closed 3 weeks ago
0
blech_run_QA error

#176 emmalala123 opened 3 weeks ago
3
Add Sample Data for testing/practice

#175 Mraymon5 opened 3 weeks ago
0
README updates, and a minor tweak to dig_in import behavior to expand compatibility with different naming conventions

#174 Mraymon5 closed 3 weeks ago
2
Update post process to have $DIR as a position argument (not kwarg) to be consistent with other scripts

#173 emmalala123 opened 4 weeks ago
0
Issue with no plots...non GUI backend in post-process

#172 emmalala123 closed 4 weeks ago
1
Make FAQ with deleting results.log for blech_run_process.py

#171 emmalala123 opened 4 weeks ago
0
ReadMe should have script usage instructions

#170 emmalala123 opened 1 month ago
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Allow multiple units ouptut from splitting

#169 natashakbt opened 1 month ago
0
Umap plot for split clusters

#168 natashakbt opened 1 month ago
0
`blech_clust/utils/blech_process_utils.py` `check_classifier_data_exists` exits if classifier data is not found,

#167 abuzarmahmood opened 1 month ago
0
params templates assume neurecommend is installed

#166 natashakbt opened 1 month ago
0
If attempting to use neurecommend and it's not installed, raise error

#165 abuzarmahmood opened 1 month ago
0
Error running blech_run_process

#164 natashakbt closed 1 month ago
7
Fix seed for all GMMs

#163 abuzarmahmood opened 1 month ago
0
Issue running blech_clust_run

#162 cmazzio closed 1 month ago
2
Cannot write to --joblog error with blech_emg_jetstream_parallel.sh

#161 natashakbt opened 1 month ago
4
Error with emg_filter.py: Hard coded file path? Commit e9a5857

#160 natashakbt closed 1 month ago
3
Error running blech_make_arrays: index out of bounds

#159 natashakbt closed 1 month ago
11
Syntax error running blech_clust_pre.sh

#158 natashakbt closed 1 month ago
8
Shuffle test for units similarity

#157 abuzarmahmood opened 2 months ago
0
Raw Recordings Removed progress bar

#156 cmazzio opened 2 months ago
0
Change np.int to int

#155 hfgem opened 3 months ago
0
Separate output paths for BSA and STFT

#154 abuzarmahmood opened 4 months ago
0
148 separate emg outputs in hdf5 by dig in

#153 abuzarmahmood closed 4 months ago
2
Merge ephys data into blech_clust

#152 abuzarmahmood opened 4 months ago
0
Maximum inter-unit differentiation project as a plotted feature to detect drift

#151 abuzarmahmood opened 4 months ago
0
Have waveform overlay plot where waveforms are colored by time (to better detect drift)

#150 abuzarmahmood opened 4 months ago
0
User post-processing on autosorted data

#149 abuzarmahmood opened 4 months ago
0
Separate EMG outputs in HDF5 by dig-in

#148 abuzarmahmood closed 4 months ago
0
Add trial inds to all emg plots

#147 abuzarmahmood opened 5 months ago
0
EMG plots with filtered signal overlayed with BSA gapes

#146 abuzarmahmood opened 5 months ago
0
144 emg classifier

#145 abuzarmahmood opened 5 months ago
4
Multi-mouth movement emg classification pipeline

#144 abuzarmahmood opened 5 months ago
0
Functionality to suggest merging of clusters

#143 abuzarmahmood closed 4 months ago
1
Functionality to automatically post-process if clustering was also automatic

#142 abuzarmahmood closed 5 months ago
2
Automatic post-processing if auto-sort is on

#141 abuzarmahmood closed 5 months ago
0
Add plot with dig-in order to QA_output dir

#140 abuzarmahmood closed 5 months ago
0
119 overlay psth add heatmaps

#139 abuzarmahmood closed 5 months ago
0
Hierarchical clustering plot to better assess cluster stability

#138 abuzarmahmood closed 5 months ago
0
Assess cluster stability using a hierarchical clutering plot

#137 abuzarmahmood closed 5 months ago
1
Have single array as output for spike-features in blech_process...

#136 abuzarmahmood opened 6 months ago
0