aertslab SCope issues - Githubissues

aertslab / SCope

Fast visualization tool for large-scale and high dimensional single-cell data

GNU General Public License v3.0

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issues

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Deploying Docker files on a VM

#416 FloWuenne closed 1 year ago
5
Search/Search space updates

#415 KrisDavie closed 3 years ago
1
API migration

#414 dweemx opened 3 years ago
0
Fix escaping regulon type determination logic early

#413 KrisDavie closed 3 years ago
0
Fix logic error

#412 KrisDavie closed 3 years ago
0
Regulon exploration tab not working on web application

#411 hbandukw closed 3 years ago
2
Fix scope.aertlsab.org url to use https protocol

#410 dweemx closed 3 years ago
1
Ability to upload new metrics or annotations

#409 KrisDavie opened 3 years ago
0
issue with permalinks

#408 tropfenameimer opened 3 years ago
0
Enable testing functions requiring a loom file

#407 KrisDavie closed 3 years ago
0
Multiple clusters (of a given clustering) with the same description lead to only 1 hit in the search results

#406 dweemx opened 3 years ago
0
Complex functions needing a loom are not tested

#405 KrisDavie closed 3 years ago
0
Bugfix/403 motif only regulons

#404 KrisDavie closed 3 years ago
0
Looms files with MotifRegulons but not TrackRegulons are unloadable

#403 KrisDavie closed 3 years ago
0
Add labels for clusterings

#402 KrisDavie closed 3 years ago
2
Fix for replacing old SearchSpace objects

#401 KrisDavie closed 3 years ago
0
Local container installation: Failed to load gRPC binary module

#400 asoete closed 3 years ago
4
Downloading loom files using API or URL

#399 bschilder opened 3 years ago
2
Matching clusters to cell-types

#398 bschilder closed 3 years ago
3
Changes to bring inline with current live instance

#397 KrisDavie closed 3 years ago
1
Compare tab freezes when loom contains at least one annotation with a lot of unique values

#396 dweemx opened 3 years ago
1
Visualizing Seurat generated .loom file on SCope

#395 cpalmateer opened 3 years ago
1
Labels do not work correctly on the compare tab

#394 KrisDavie opened 3 years ago
0
Loom files with large annotations cause the compare tab to freeze

#393 KrisDavie opened 3 years ago
1
Labels do not display when changing coordinates

#392 KrisDavie opened 3 years ago
0
Seurat umap in Scope

#391 macsalvin opened 3 years ago
1
Crowd annotation should be displayed in right side bar table when querying for "All Clusters"

#390 dweemx closed 3 years ago
0
Extra type checks

#389 MaybeJustJames closed 3 years ago
0
Adds basic Feature Label display to the viewer

#388 MaybeJustJames closed 3 years ago
0
Add support for h5ad files (Scanpy)

#387 dweemx opened 3 years ago
0
Feature/321 setup sqlalchemy alembic

#386 dweemx closed 3 years ago
0
ATAC-RNA integration

#385 MaybeJustJames opened 3 years ago
0
Fresh install fails

#384 dweemx closed 3 years ago
1
Deploying SCope with Docker

#383 dweemx closed 3 years ago
2
Bump Server dependencies

#382 MaybeJustJames closed 3 years ago
0
Initial front-end restructure and code re-design

#381 MaybeJustJames closed 3 years ago
8
Fix non collapsed descriptions

#380 KrisDavie closed 3 years ago
0
Add ESLint rule to forbid `==` and `!=` in JavaScript

#379 MaybeJustJames closed 3 years ago
0
Install Immer and update some front-end dev dependencies

#378 MaybeJustJames closed 4 years ago
0
Simplify and organise the FeatureSearchBox component

#377 MaybeJustJames closed 4 years ago
0
Implement pre-commit hooks

#376 KrisDavie closed 2 years ago
1
Add result type

#375 KrisDavie closed 4 years ago
0
Add result type

#374 KrisDavie closed 4 years ago
0
Mega Tracking task: front-end cleanup and organisation

#373 MaybeJustJames closed 3 years ago
0
Add a Result type and tests

#372 MaybeJustJames closed 4 years ago
2
Fix small typo in redux state update

#371 MaybeJustJames closed 4 years ago
0
VSN Pipelines Page

#370 KrisDavie opened 4 years ago
1
Bump lodash from 4.17.15 to 4.17.19 in /opt/scopeserver/bindserver

#369 dependabot[bot] closed 3 years ago
1
what is the exact mean of superposition?

#368 sygongcode closed 4 years ago
2
scope-client doesn't start when deploying SCope as aws instance

#367 GMaciag closed 4 years ago
10

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