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allenai
/
scispacy
A full spaCy pipeline and models for scientific/biomedical documents.
https://allenai.github.io/scispacy/
Apache License 2.0
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Configuration for model locations
#469
buddha314
opened
1 year ago
3
How to extract all species names in a document?
#468
bpersevere
closed
1 year ago
4
Can you finetune the pre-trained algoritms in scispacy to add more labels?
#467
kharanshu2
closed
1 year ago
1
Update release readme
#466
dakinggg
closed
10 months ago
0
Degradation in en-core-sci-scibert model performance
#465
aryehgigi
closed
1 year ago
1
UserWarning: [W036] The component 'matcher' does not have any patterns defined.
#464
hrshdhgd
closed
1 year ago
1
"Mesh" and "Hpo" linkers give the same result
#463
almogmor
closed
1 year ago
8
incompatability error when installing en_core_sci_sm
#462
EmanuelFaria
closed
1 year ago
1
entity recognition doesn't recognize locations
#461
maayansharon10
closed
1 year ago
1
Update UMLS to latest release
#460
rxk2rxk
closed
1 year ago
15
Run Sample ERROR.
#459
vegaviazhang
closed
1 year ago
5
CVE-2007-4559 Patch
#458
TrellixVulnTeam
closed
1 year ago
0
Cannot find how to access that umls_semantic_type_tree.tsv file
#457
agr505
closed
1 year ago
0
Update README.md
#456
dakinggg
closed
1 year ago
0
nmslib install error using a conda env on mac m1
#455
briangriner
closed
1 year ago
6
Is it possible to pre-download data file for UMLS?
#454
rjiang9
closed
1 year ago
2
Fix typo
#453
andyjessen
closed
1 year ago
0
Modify short form filter function
#452
andyjessen
closed
1 year ago
4
Conjunctions in noun phrases
#451
chrishmorris
closed
1 year ago
1
Trouble training custom NER model for en_core_sci_lg - "ValueError: Can't read file: project_data/vocab_lg.jsonl"
#450
Jason-B-Jiang
closed
1 year ago
3
0.5.1 (spacy 3.4.x) upgrade
#449
dakinggg
closed
1 year ago
0
scibert model doesn't split sentences
#448
dakinggg
closed
1 year ago
0
Error running sample code: OSError: [Errno 36] File name too long
#447
kryptec
opened
1 year ago
1
Error thrown out at LINE: from scispacy.linking import EntityLinker
#446
rjiang9
closed
1 year ago
3
Unable to install scispacy on windows using pip
#445
Cbezz
closed
1 year ago
2
Drug name entity recognition
#444
Frank-LIU-520
closed
1 year ago
1
zipfile.BadZipFile: File is not a zip file
#443
lzxlin
closed
1 year ago
4
Error installing scispacy for M1 Mac
#442
pika97
closed
1 year ago
4
Unexpected abbreviation detection behaviour
#441
mpetruc
closed
1 year ago
3
Training scispacy pipelines require recreating the vocab file
#440
Hammad-NobleAI
opened
2 years ago
6
encoding="utf-8"
#439
NetRxn
closed
1 year ago
3
ERROR: pip's dependency resolver does not currently take into account all the packages that are installed
#438
EmanuelFaria
closed
2 years ago
2
EntityLinker Import Kills Kernel
#437
Kate-Phillips
closed
2 years ago
1
Releasing a tool to PyPi with an `en_ner_craft_md` dependency
#436
hrshdhgd
closed
2 years ago
1
RxCUIs when 'rxnorm' is selected
#435
jeonge1
closed
1 year ago
1
Spacy >=3.3.0
#434
mpetruc
closed
1 year ago
4
MeSH + OMIM entity linkers for a single piece of text at a time
#433
srishti-git1110
closed
1 year ago
1
Installation issue with Python 3.9
#432
smakurugoda
closed
2 years ago
1
pip install failed
#431
zhangweida2080
closed
2 years ago
1
HTTPSCOnnectionPool for s3=us-west-2.amazonaws.com
#430
HodaMemar
closed
2 years ago
1
Entity linking future directions
#429
eric-czech
opened
2 years ago
2
Combining EntityLinker
#428
GDsika
closed
2 years ago
1
how to get per entity evaluation score in ner models of scispacy
#427
Utkarsh-2511
closed
2 years ago
1
Install issue with nmslib
#426
dataRunner2
closed
2 years ago
1
Spacy 32 upgrade
#425
dakinggg
closed
2 years ago
0
Compatibility with Apple Silicon
#424
ghostintheshellarise
closed
2 years ago
2
Pin black dependency due to compatibility issue between click (from b…
#423
dakinggg
closed
2 years ago
0
Pin black dependency due to compatibility issue between click (from b…
#422
dakinggg
closed
2 years ago
0
any guidance on ontonotes prep?
#421
mprorock
opened
2 years ago
1
Correct a download issue related to s3 auth
#420
mprorock
closed
2 years ago
2
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