alliance-genome agr_file_generator issues

alliance-genome / agr_file_generator

This repo is for generating files from Alliance resources

MIT License

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issues

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Update LICENSE

#152 chris-grove closed 1 week ago
0
Bump urllib3 from 1.26.13 to 1.26.18

#151 dependabot[bot] opened 1 year ago
0
Bump urllib3 from 1.26.13 to 1.26.17

#150 dependabot[bot] closed 1 year ago
1
KANBAN-364 Fix to accommodate Neo4j 5.5 upgrade.

#149 christabone closed 1 year ago
0
KANBAN-364 Update PyYAML version.

#148 christabone closed 1 year ago
2
Bump requests from 2.27.1 to 2.31.0

#147 dependabot[bot] closed 1 year ago
0
Release 5.4.0

#146 oblodgett closed 1 year ago
0
Loader import SCRUM-2424

#145 oblodgett closed 1 year ago
0
Release 5.4.0

#144 oblodgett closed 1 year ago
0
Update Depends

#143 oblodgett closed 1 year ago
0
Bump wheel from 0.33.4 to 0.38.1

#142 dependabot[bot] closed 1 year ago
0
SCRUM-1884 XB onboarding fix

#141 mluypaert closed 2 years ago
0
SCRUM-1125 Uniprot xref file header

#140 markquintontulloch closed 2 years ago
0
Release 4.2.0 into master

#139 oblodgett closed 2 years ago
0
SCRUM-1100

#138 markquintontulloch closed 2 years ago
2
Fixing scope of if statement to get expression tsv generated SCRUM-1027

#137 adamjohnwright closed 2 years ago
0
fixing scope of if statement to get expression tsv generated SCRUM-1027

#136 adamjohnwright closed 2 years ago
1
Release 4.1.0 into Master

#135 oblodgett closed 3 years ago
0
removed Bio from requirements AGR-3047 (this NEEDS to get fixed in the loader DO NOT MERGE)

#134 oblodgett closed 3 years ago
1
removed Bio from requirements (this needs to get fixed)

#133 oblodgett closed 3 years ago
0
Delete bio package

#132 oblodgett closed 3 years ago
0
changing to molecularConsequences AGR-3041

#131 adamjohnwright closed 3 years ago
0
Bump urllib3 from 1.24.2 to 1.26.5

#130 dependabot[bot] closed 3 years ago
0
Release 4.0.0 into Master

#129 oblodgett closed 3 years ago
0
Bump pyyaml from 5.1 to 5.4

#128 dependabot[bot] closed 3 years ago
0
AGR-2528 - Changed aws cli usage from local install to docker image

#127 mluypaert closed 3 years ago
0
Variant cross ref fix AGR-2430

#126 adamjohnwright closed 3 years ago
0
Making it so that we are submitting bgzipped files to FMS via VCF Datatype - AGR-2642

#125 adamjohnwright closed 3 years ago
0
Merge master into 4.0.0

#124 oblodgett closed 3 years ago
0
AGR-2590 file generator

#123 mluypaert closed 3 years ago
0
Fixing small duplication issue and typo in variant-allele file - AGR-2430

#122 adamjohnwright closed 3 years ago
0
Testing settings for output path and adding in logic for OMIM Via RGD AGR-2574

#121 adamjohnwright closed 3 years ago
0
Getting the Source from the cross ref not dataprovider now AGR-2574

#120 adamjohnwright closed 3 years ago
0
Add variant allele file AGR-2430

#119 adamjohnwright closed 3 years ago
0
adding is_not_implicated_in AGR-2572

#118 adamjohnwright closed 3 years ago
1
AGR-2528 file-generator dockerhub => ECR code-changes

#117 mluypaert closed 3 years ago
2
Added code for base images

#116 oblodgett closed 4 years ago
0
Release 3.2.0 into Master

#115 oblodgett closed 4 years ago
0
Pick up change from before release branch was taken

#114 oblodgett closed 4 years ago
0
Update Dockerfile AGR-2247

#113 adamjohnwright closed 4 years ago
1
Allele GFF AGR-1808

#112 adamjohnwright closed 4 years ago
1
Fixing vcf header warnings

#111 adamjohnwright closed 4 years ago
0
Allele GFF #AGR-2231

#110 adamjohnwright closed 4 years ago
2
Human genes interacting with #AGR-2384

#109 adamjohnwright closed 4 years ago
1
fix(requirements): removed package Bio from requirements

#108 valearna closed 4 years ago
1
AGR-2343

#107 sierra-moxon closed 4 years ago
0
adding tabix files to VCF generation #AGR-2323

#106 adamjohnwright closed 4 years ago
4
Adding file validation before file upload AGR-2318

#105 adamjohnwright closed 4 years ago
0
Check FMS response and throw error after 5 attemps - fix

#104 adamjohnwright closed 4 years ago
2
Adding headers to JSON files AGR-2296

#103 adamjohnwright closed 4 years ago
0