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althonos
/
pronto
A Python frontend to (Open Biomedical) Ontologies.
https://pronto.readthedocs.io
MIT License
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48
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Update sphinx requirement from ~=2.3 to ~=5.1
#183
dependabot[bot]
closed
2 years ago
1
Cannot install latest version in new virtual environment
#182
pkalita-lbl
closed
2 years ago
3
Update fastobo requirement from ~=0.11.1 to ~=0.12.1
#181
dependabot[bot]
closed
2 years ago
2
Consider adding kgcl bindings
#180
cmungall
opened
2 years ago
0
#176 - handle missing label in SynonymTypeProperty
#179
davmlaw
closed
2 years ago
1
AttributeError: module 'fastobo.typedef' has no attribute 'IsClassLevel' when saving obo file
#178
cmungall
closed
2 years ago
1
Accessing children of a relationship
#177
manulera
opened
2 years ago
3
Latest hp.owl fails due to SynonymTypeProperty w/o label with AttributeError: 'NoneType' object has no attribute 'text'
#176
davmlaw
closed
2 years ago
1
BaseIdent TypeError when saving obo files with property chains
#175
cmungall
closed
2 years ago
1
Getting Relationships
#174
krishanudb
opened
2 years ago
3
How to hide logging
#173
cthoyt
closed
2 years ago
3
Update ipython requirement from ~=7.11 to ~=8.4
#172
dependabot[bot]
closed
2 years ago
2
Update sphinx requirement from ~=2.3 to ~=5.0
#171
dependabot[bot]
closed
2 years ago
2
Update semantic-version requirement from ~=2.8 to ~=2.10
#170
dependabot[bot]
closed
1 year ago
1
The "replaced by" terms are not extracted in certain situations
#169
tskir
closed
1 year ago
3
Added support for parsing Turtle files for Ontologies
#168
Pragya2804
opened
2 years ago
1
Add get_uri method to term.py class
#167
IshaGupta18
opened
2 years ago
0
Update ipython requirement from ~=7.11 to ~=8.3
#166
dependabot[bot]
closed
2 years ago
2
Cannot import gene ontology
#165
manulera
closed
2 years ago
3
module 'fastobo.typedef' has no attribute 'IsMetadataClause'
#164
cmungall
closed
2 years ago
2
It should be possible to filter out relationships based on GCIs
#163
cmungall
opened
2 years ago
1
Bioconda doesn't install latest Pronto
#162
ireneisdoomed
opened
2 years ago
1
Update ipython requirement from ~=7.11 to ~=8.2
#161
dependabot[bot]
closed
2 years ago
2
Update sphinx requirement from ~=2.3 to ~=4.5
#160
dependabot[bot]
closed
2 years ago
2
Is there a way to adjust the obo parsing strictness?
#159
mwalzer
opened
2 years ago
4
Loading ontologies fails (for me) in 2.4.4
#158
mwalzer
opened
2 years ago
3
Update ipython requirement from ~=7.11 to ~=8.1
#157
dependabot[bot]
closed
2 years ago
2
CL has KeyError: 'CARO:0000000'
#156
quirinmanz
opened
2 years ago
4
Update semantic-version requirement from ~=2.8 to ~=2.9
#155
dependabot[bot]
closed
2 years ago
2
Update fastobo requirement from ~=0.10.0 to ~=0.11.1
#154
dependabot[bot]
closed
2 years ago
1
How to parse Orphanet OWL file (new version 4.0) part_of relationship
#153
LM-Ontologies
opened
2 years ago
0
Update sphinx requirement from ~=2.3 to ~=4.4
#152
dependabot[bot]
closed
2 years ago
2
Update ipython requirement from ~=7.11 to ~=8.0
#151
dependabot[bot]
closed
2 years ago
1
Update sphinx requirement from ~=2.3 to ~=4.3
#150
dependabot[bot]
closed
2 years ago
1
Dump as OWL
#149
cthoyt
opened
3 years ago
6
Update sphinx requirement from ~=2.3 to ~=4.2
#148
dependabot[bot]
closed
2 years ago
1
Update fastobo requirement from ~=0.10.0 to ~=0.10.2
#147
dependabot[bot]
closed
2 years ago
1
OBO parsing fails with a misleading error message
#146
mukund109
opened
3 years ago
1
Documentation is missing `term.relationships` attribute
#145
mukund109
closed
3 years ago
1
Update sphinx requirement from ~=2.3 to ~=4.1
#144
dependabot[bot]
closed
3 years ago
2
Update recommonmark requirement from ~=0.6 to ~=0.7
#143
dependabot[bot]
closed
1 year ago
2
Update nbsphinx requirement from ~=0.5 to ~=0.8
#142
dependabot[bot]
closed
1 year ago
2
Update fastobo requirement from ~=0.10.0 to ~=0.10.1
#141
dependabot[bot]
closed
3 years ago
2
Error parsing `aro.owl` (identifier already in use)
#140
althonos
opened
3 years ago
0
Add `obofoundry` topic
#139
cthoyt
closed
3 years ago
1
Fix _extract_term
#138
flying-sheep
closed
3 years ago
2
How to delete terms in ontology?
#137
saiden89
opened
3 years ago
2
Pronto 2.4.1 and dependency chardet 4.0.0
#136
piechottam
closed
3 years ago
1
Update sphinx requirement from ~=2.3 to ~=4.0
#135
dependabot-preview[bot]
closed
1 year ago
1
Upgrade to GitHub-native Dependabot
#134
dependabot-preview[bot]
closed
3 years ago
2
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