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anopheles-genomic-surveillance
/
anopheles-genomic-surveillance.github.io
Lecture notes for a course on genomic surveillance of malaria vectors, developed by PAMCA and MalariaGEN
https://anopheles-genomic-surveillance.github.io/
Creative Commons Attribution Share Alike 4.0 International
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W6M1 - Updates and Maintenance 30/04/24
#229
jonbrenas
closed
4 months ago
1
W5M3 update
#228
KellyLBennett
closed
4 months ago
8
W7M1 - French Typo (and also a bit English)
#227
jonbrenas
closed
4 months ago
0
W7M1 - So much new data!
#226
jonbrenas
closed
4 months ago
0
W3M1 - No CNVs for some sample sets
#225
jonbrenas
closed
4 months ago
1
W* - Include note on authentication
#224
ahernank
opened
5 months ago
1
W6M3 - Warning about multiple competing values for 'toolbar.active_drag' (to be addressed before 4th iteration)
#223
jonbrenas
closed
4 months ago
0
W6M1 - Error when accessing haplotypes
#222
jonbrenas
closed
4 months ago
0
W8M2 video issue
#221
KellyLBennett
closed
4 months ago
1
W5M3 video colab discrepancies
#220
KellyLBennett
closed
4 months ago
0
W4M3 - fix html rendering
#219
ahernank
closed
5 months ago
0
W4 - Add fixes
#218
ahernank
closed
5 months ago
0
W5M2 video link missing
#217
KellyLBennett
closed
5 months ago
1
W5M1 access CNV calls
#216
KellyLBennett
closed
4 months ago
1
W3M1 - Typos in the French exercises
#215
jonbrenas
closed
5 months ago
0
W3M1 - Typos in the French exercises
#214
jonbrenas
closed
5 months ago
0
W3M4 - fix small typo in no. of cols
#213
ahernank
closed
5 months ago
0
W3M4 - pin API to v7.15.0
#212
ahernank
closed
5 months ago
0
W3M4 - Example PCAs have changed between API versions
#211
ahernank
opened
5 months ago
1
W3 - add fixes
#210
ahernank
closed
5 months ago
0
W3M3 - view_alignments() issues with resource access
#209
ahernank
closed
5 months ago
5
W4M4 - Update URLs
#208
harbi811
closed
5 months ago
0
W3M3 - Update map of GC locations and link to IGV docs
#207
harbi811
closed
5 months ago
1
W1-M3/W2-M1/W6-M4 (fourth iteration) Deprecate geneset() use in favour of genome_features()
#206
ahernank
opened
6 months ago
0
Use geneset() instead of genome_features()
#205
ahernank
closed
6 months ago
1
W2M1 - update var name
#204
ahernank
closed
6 months ago
1
W1M4 - Wrong hint in question 5
#203
jonbrenas
opened
6 months ago
0
W1 - del notebook arg from `fig.show()`
#202
ahernank
closed
6 months ago
0
W2 - re-run w/mgen 8.7.0 & address misc issues
#201
ahernank
closed
6 months ago
1
W2-M3 (fourth iteration) `plot_cnv_hmm_coverage()` UserWarning
#200
ahernank
opened
6 months ago
1
W* - Update code to only use 3.0 data subset
#199
ahernank
closed
4 months ago
2
W2 - Update text
#198
ahernank
closed
4 months ago
1
Workshop 2 (third iteration) - Update links
#197
harbi811
closed
6 months ago
2
Workshop 1 (third iteration) - Update links
#196
harbi811
closed
6 months ago
1
W1 - re-run w/mgen 8.7.0 & address misc issues
#195
ahernank
closed
6 months ago
1
mgen_data API - future warnings
#194
ahernank
opened
7 months ago
0
Use %pip instead of !pip
#193
alimanfoo
closed
4 months ago
2
Potential typo in workshop7/module 2
#192
Eric-Kobayashi
opened
1 year ago
0
Typo in the exercises of /workshop-7/module-3-haplotype-clustering.html
#191
jonbrenas
closed
4 months ago
1
W8 - maintenance
#190
ahernank
closed
1 year ago
0
W8M1/2 - correct NB title in colab
#189
ahernank
closed
1 year ago
0
W7 - maintenance
#188
ahernank
closed
1 year ago
1
W7M1 - Update # of aa changes in example df
#187
ahernank
closed
1 year ago
0
W6 - Fix primer3 link & nb name
#186
ahernank
closed
1 year ago
0
Update metadata names
#185
ahernank
closed
1 year ago
0
Workshop ^
#184
cclarkson
closed
1 year ago
0
W7M4 - Plot haplotype network examples failure
#183
harbi811
closed
1 year ago
0
W6M4 - KeyError in notebook and minor corrections
#182
harbi811
closed
1 year ago
2
W5 maintenance
#181
ahernank
closed
1 year ago
0
W5M4 - Remove commented code for diagrams viewer import
#180
ahernank
closed
1 year ago
0
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