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aramis-lab
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clinica
Software platform for clinical neuroimaging studies
http://www.clinica.run/
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[DOC] Online documentation not accessible until early July
#1209
NicolasGensollen
closed
3 months ago
1
[REF] BIDS : proposition for function create_participants_df from bids_utils
#1208
AliceJoubert
opened
3 months ago
0
[ENH] Use enumeration for SUVR reference regions
#1207
NicolasGensollen
closed
3 months ago
0
[MAINT] Missing unit tests for bids_utils
#1206
AliceJoubert
closed
3 months ago
1
[TEST] Update test for nifd-to-bids converter
#1205
NicolasGensollen
closed
3 months ago
0
[MAINT] Remove function BidsGuess
#1204
AliceJoubert
closed
3 months ago
0
[TEST] Update test for aibl-to-bids converter
#1203
NicolasGensollen
closed
3 months ago
0
[TEST] Update test for habs-to-bids converter
#1202
NicolasGensollen
closed
3 months ago
0
[CI] Fix deploy step in documentation pipeline
#1201
NicolasGensollen
closed
3 months ago
0
[REF] BIDS : refactor function `create_participants_df` from `bids_utils`
#1200
AliceJoubert
closed
3 months ago
0
[DOC] ADNI-to-BIDS : add Field Mapping (FMAP) specificities
#1199
AliceJoubert
closed
3 months ago
1
[FIX] ADNI-to-BIDS fmap conversion : delete real/imaginary files properly, enable converting to the same folder for fmap
#1198
AliceJoubert
closed
3 months ago
2
The links for installing ITK are broken
#1197
NicolasGensollen
closed
3 weeks ago
2
[ENH] ADNI-to-BIDS converts only subjects in the provided ADNI directory if no subjects list is given
#1196
AliceJoubert
closed
4 months ago
0
ADNI_to_BIDS utils : `load_clinical_csv`, hidden csv file matching, issue #1163
#1195
HuguesRoy
opened
4 months ago
1
[CI] Fix typo in GitHub context variable in documentation deploy pipeline
#1194
NicolasGensollen
closed
4 months ago
0
[CI] Fix wrong folder name when deploying doc
#1193
NicolasGensollen
closed
4 months ago
0
[CI] Fix deployed documentation folder names
#1192
NicolasGensollen
closed
4 months ago
0
[CI] Use Github Actions to build and deploy documentation
#1191
NicolasGensollen
closed
4 months ago
0
[ENH] Proposition for adni-to-bids converter FMAP renaming
#1190
AliceJoubert
closed
4 months ago
3
[BUG] In adni-to-bids, empty sessions files are not cleaned up
#1189
AliceJoubert
opened
4 months ago
4
[FIX] Properly deleting real and imaginary files for FMAP in adni-to-bids converter.
#1188
AliceJoubert
closed
4 months ago
2
Bump requests from 2.31.0 to 2.32.0
#1187
dependabot[bot]
closed
4 months ago
0
[ENH] Enable debugging in converters
#1186
NicolasGensollen
closed
4 months ago
0
[FIX] Fix calls to `matplotlib.cm.get_cmap`
#1185
NicolasGensollen
closed
4 months ago
0
[FIX] Fix handlers addition to the clinica logger
#1184
NicolasGensollen
closed
4 months ago
0
Enable debugging for converters using multiprocessing
#1183
NicolasGensollen
closed
4 months ago
0
Deprecated `get_cmap` function was removed in Matplotlib 3.9.0
#1182
NicolasGensollen
closed
4 months ago
0
[FIX] Fix logging in adni to bids
#1181
NicolasGensollen
closed
4 months ago
0
[FIX] Fix inconsistent logging in function `run_dcm2niix`
#1180
NicolasGensollen
closed
4 months ago
0
Logging of `run_dcm2niix` is not consistent with the conversion result
#1179
NicolasGensollen
closed
4 months ago
0
Fix logic in adni_utils by restoring loops in create_file
#1178
AliceJoubert
closed
4 months ago
2
add "real" and "imaginary" file endings to return fmap in adni_utils.py
#1177
likeajumprope
closed
4 months ago
1
[MAINT] Delete `SurfStat` vendored toolbox
#1176
NicolasGensollen
closed
4 months ago
0
[ENH] Proposition for adni_fmap renaming function
#1175
AliceJoubert
closed
4 months ago
0
Refactor and test `adni_fmap.py`
#1174
NicolasGensollen
closed
4 days ago
2
Bump jinja2 from 3.1.3 to 3.1.4
#1173
dependabot[bot]
closed
4 months ago
0
[Converter] ADNI-to-BIDS does not take into account history of conversion when ran successively to the same folder
#1172
AliceJoubert
opened
4 months ago
2
[CI] Change unorganized folder for adni to bids tests
#1171
NicolasGensollen
closed
4 months ago
0
Bump tqdm from 4.66.1 to 4.66.3
#1170
dependabot[bot]
closed
5 months ago
0
[FIX] Fixes DWI preprocessing using T1 when images are 3D
#1169
NicolasGensollen
closed
2 months ago
0
Clarify in the documentation of `PETLinear` how to specify the reconstruction method
#1168
NicolasGensollen
closed
5 days ago
1
pet-files not found
#1167
espentrydal
closed
5 months ago
8
nipype.pipeline.engine.nodes.NodeExecutionError: Exception raised while executing Node 0-InitNode.
#1166
espentrydal
closed
2 months ago
18
Move documentation build and deploy to GitHub Actions
#1165
NicolasGensollen
closed
4 months ago
3
Remove clinica surfstat toolbox
#1164
NicolasGensollen
closed
4 months ago
0
Ignore hidden CSV files in `load_clinical_csv`
#1163
NicolasGensollen
opened
5 months ago
1
[ENH] Unify DatasetType class
#1162
AliceJoubert
closed
5 months ago
3
[CI] Fix MacOS GitHub runner target
#1161
NicolasGensollen
closed
5 months ago
0
[ENH] Add crop_nifti to public API
#1160
AliceJoubert
closed
5 months ago
0
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