arundurvasula angsd-wrapper issues

arundurvasula / angsd-wrapper

A project for extending ANGSD

MIT License

8 stars 12 forks source link

issues

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Inbreeding values using NgsAdmix

#102 ericgonzalezs closed 6 years ago
1
depre

#101 rossibarra closed 8 years ago
1
fst bp?

#100 rossibarra closed 8 years ago
0
Errors when working through tutorial

#99 ChaochihL closed 9 years ago
8
Syntax Errors with ANGSD-wrapper

#98 ChaochihL closed 9 years ago
4
shiny thetas issue

#97 arundurvasula opened 9 years ago
0
shiny thetas and SFS graphing issues

#96 ChaochihL closed 9 years ago
3
"Upstream Work" in Wiki

#95 TomJKono closed 9 years ago
1
No PCA.conf

#94 tvkent closed 9 years ago
1
intelligent crashes

#93 tvkent opened 9 years ago
1
common variables

#92 tvkent closed 9 years ago
2
file names

#91 tvkent closed 9 years ago
3
added installation

#90 arundurvasula closed 9 years ago
0
Renamed files

#89 mojaveazure closed 9 years ago
1
readme update

#88 rossibarra closed 9 years ago
2
Shiny updates/2DSFS update

#87 tvkent closed 9 years ago
0
Header Requirements

#86 mojaveazure closed 9 years ago
1
Configuration confusing and limiting

#85 mojaveazure closed 9 years ago
5
fst subsetting in shiny

#84 tvkent opened 9 years ago
0
fst plotting works except subsetting

#83 tvkent closed 9 years ago
2
script to install dependencies

#82 arundurvasula closed 9 years ago
2
Have you considered Pacbio?

#81 arundurvasula closed 9 years ago
0
typo in inbreeding arg

#80 tvkent closed 9 years ago
1
intersect file fix for multiple chromosomes

#79 tvkent closed 9 years ago
0
option to add filename extensions

#78 tvkent closed 9 years ago
2
Add intersect to Fst output

#77 arundurvasula closed 9 years ago
1
Add a license

#76 arundurvasula closed 9 years ago
1
description of expected out files

#75 tvkent opened 9 years ago
6
New 2dsfs and fst

#74 tvkent closed 9 years ago
0
GFF in zoomed plot

#73 dmvelasco closed 9 years ago
3
echo stuff

#72 tvkent closed 9 years ago
3
rewritten to work

#71 tvkent closed 9 years ago
0
check all scripts for file_exists

#70 tvkent closed 9 years ago
2
sfs has problems with doGlf and doGeno

#69 tvkent closed 9 years ago
0
ABBA easter egg

#68 tvkent closed 9 years ago
0
add reference fasta sort fix

#67 arundurvasula closed 9 years ago
2
ngsF directory missing

#66 tvkent closed 9 years ago
2
fixed path for N_SITES calculation

#65 tvkent closed 9 years ago
0
ZengE and Fu and Li's D have weird plots

#64 arundurvasula opened 9 years ago
2
Thetas: ability to remove windows where nSites < x

#63 arundurvasula closed 9 years ago
1
Fst base pairs

#62 arundurvasula closed 9 years ago
2
genotype likelihoods and ngsF

#61 tvkent closed 9 years ago
0
Ecl298

#60 arundurvasula closed 9 years ago
0
Automate creation of config files for multiple regions

#59 arundurvasula closed 9 years ago
1
stuff we want

#58 rossibarra closed 9 years ago
6
Add NSITES calculation to Fst

#57 arundurvasula closed 9 years ago
0
Spinny wheel

#56 rossibarra closed 9 years ago
1
shiny loads example file on error

#55 rossibarra opened 9 years ago
0
SNP call w/ANGSD

#54 SidBhadra-Lobo closed 9 years ago
1
Extra classes in the SFS

#53 ghost closed 9 years ago
0