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bcgsc
/
tigmint
⛓ Correct misassemblies using linked AND long reads
https://bcgsc.github.io/tigmint/
GNU General Public License v3.0
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Remove python long-to-linked code
#53
lcoombe
closed
3 years ago
0
Error : no progress of scaffolding running
#52
kishore556
closed
3 years ago
5
Update to streaming reads for tigmint-long
#51
lcoombe
closed
3 years ago
0
Error when attempting tigmint-make arcs
#50
katherinedougan
closed
3 years ago
2
clang-tidy fix
#49
MurathanGoktas
closed
3 years ago
1
Change azure-pipelines.yml to use conda environment
#48
lcoombe
closed
3 years ago
0
long-to-linked-pe: trigger parameter g check if only span needs to be estimated
#47
jwcodee
closed
3 years ago
0
Long to linked pe cpp port
#46
jwcodee
closed
3 years ago
0
Paf tigmint molecule
#45
lcoombe
closed
3 years ago
0
tigmint-make tigmint error
#44
wjj666
closed
3 years ago
2
Prepare for Release Version 1.2.2
#43
janetxinli
closed
3 years ago
3
Speed up and calculate dist parameter for tigmint-long
#42
janetxinli
closed
3 years ago
3
Fix barcode naming bug
#41
janetxinli
closed
3 years ago
0
Release version 1.2.0
#40
janetxinli
closed
3 years ago
2
Tigmint not making cuts
#39
elsemikk
closed
3 years ago
3
Add tigmint-long functionality
#38
janetxinli
closed
3 years ago
4
Implement azure pipeline for CI and user tests
#37
janetxinli
closed
3 years ago
5
Stalebot
#36
janetxinli
closed
3 years ago
0
tigmint parameters with multiple linked reads
#35
hidvegin
closed
3 years ago
17
Changing /tmp location
#34
ilaydabozan
closed
4 years ago
4
Tigmint performance on large genome
#33
andreaswallberg
closed
4 years ago
3
tigmint-molecule silent
#32
francicco
closed
4 years ago
3
Tigmint-cut not working correctly
#31
majogomezhughes
closed
4 years ago
1
tigmint molecule Error 1
#30
darencard
closed
3 years ago
4
tigmint-molecule
#29
francicco
closed
5 years ago
11
Tigmint liftover
#28
jesszha
closed
3 years ago
1
recipe for target 'merged.barcoded.as0.65.nm5.molecule.size2000.trim0.window1000.span20.breaktigs.barcoded.sortn.bam' failed
#27
ewafula
closed
4 years ago
1
pip installation corrupt
#26
schellt
closed
3 years ago
5
support pysam 0.15.1
#25
lhui2010
closed
3 years ago
1
Unknown error preventing tigmint-make across multiple installation methods
#24
DrPintoThe2nd
closed
5 years ago
2
multiple intervals with the same barcode
#23
dcopetti
closed
5 years ago
3
Can I get the breakpoint information?
#22
luyang93
closed
5 years ago
2
gsed: command not found
#21
mossishahi
closed
5 years ago
16
Add parameter for min reads per molec (for tigmint-molecule), fix missing molecule bug
#20
lcoombe
closed
3 years ago
2
Liftover compatible version
#19
jesszha
closed
3 years ago
1
Tigmint span
#18
jesszha
closed
6 years ago
0
Tigmint only works when files are in working directory
#17
lculibrk
closed
3 years ago
2
Tigment not found by Linuxbrew
#16
dminkley
closed
6 years ago
1
Scaffolds output tigmint-arcs error
#15
JordideRaad
closed
6 years ago
7
Runtime on finding breakpoints
#14
JordideRaad
closed
6 years ago
3
myassembly.myreads.as0.65.nm5.molecule.tsv in null
#13
shameem356
closed
6 years ago
7
tigmint-make errors
#12
macarima
closed
6 years ago
3
Using MinION reads
#11
asdcid
closed
3 years ago
6
Provide 'make install' procedure
#10
mmokrejs
closed
6 years ago
1
Tigmint's principle to break sequences
#9
dcopetti
closed
6 years ago
4
write temporary bam files
#8
dcopetti
closed
6 years ago
16
brew install arcs failed
#7
QiushiLi
closed
6 years ago
2
ImportError: /lib64/libc.so.6: version `GLIBC_2.18' not found
#6
QiushiLi
closed
6 years ago
7
samtools sort error (sort: invalid option -- 't')
#5
QiushiLi
closed
6 years ago
2
make: *** No rule to make target `***.as0.65.nm5.molecule.tsv', needed by `tigmint'. Stop.
#4
QiushiLi
closed
6 years ago
4
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