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bedapub
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splicekit
splicekit: an integrative toolkit for splicing analysis from short-read RNA-seq
GNU General Public License v3.0
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Tab characters required for the samples.tab file
#27
Amit-H
closed
1 year ago
1
Dockerfile
#26
grexor
closed
1 year ago
0
Lowly expressed features filter
#25
grexor
closed
1 year ago
0
Dockerfile update
#24
grexor
closed
1 year ago
0
Suggested updated docs (PDF file) with commenting on Google docs
#23
grexor
closed
1 year ago
0
Docs
#22
grexor
closed
1 year ago
0
Junctions min count filter as parameter
#21
grexor
closed
1 year ago
0
Docs update
#20
grexor
closed
1 year ago
0
Updates
#19
grexor
closed
1 year ago
0
Updated motifs, annotation, report
#18
grexor
closed
1 year ago
0
Several updates, singularity image from ghcr (Docker import) etc.
#17
grexor
closed
1 year ago
0
Junctions reference with annotation, docs update
#16
grexor
closed
1 year ago
0
junctions.py to allow parsing of bams + gtf from command line
#15
grexor
opened
1 year ago
0
rMATS with jobs / shell script, container path for singularity
#14
grexor
closed
1 year ago
0
Deploy Dockerfile to main branch
#13
grexor
closed
1 year ago
0
Docker
#12
grexor
closed
1 year ago
0
Dev
#11
grexor
closed
1 year ago
0
rMATS
#10
grexor
closed
1 year ago
0
rMATS interface
#9
grexor
closed
1 year ago
0
rm deta_dar(); same as delta_dai but gave error
#8
Arnollo2
closed
1 year ago
0
pi_value computations
#7
Arnollo2
closed
1 year ago
0
sync reporting with jbrowse track names
#6
Arnollo2
closed
1 year ago
0
Dev
#5
Arnollo2
closed
1 year ago
0
jbrowse changes
#4
Arnollo2
closed
1 year ago
0
deltaDAR plus corrected indexing Jbrowse2
#3
Arnollo2
closed
1 year ago
0
Splicekit.junctions.tab doesn't exist
#2
sonicwang1997
closed
1 year ago
34
Singularity splicekit is not working
#1
marina-yurieva
closed
1 year ago
1
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