bgruening docker-galaxy issues

bgruening / docker-galaxy

:whale::bar_chart::books: Docker Images tracking the stable Galaxy releases.

http://bgruening.github.io/docker-galaxy

MIT License

226 stars 134 forks source link

issues

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Fix corrupted conda packages

#561 abretaud closed 4 years ago
1
[20.05] several bug fixes

#560 abretaud closed 4 years ago
3
Fix missing admin user for flavors

#559 abretaud closed 4 years ago
3
The 20.05 Galaxy release

#558 bgruening closed 4 years ago
0
Update standalone to 20.05

#557 abretaud closed 4 years ago
7
Fix CI artifacts & retry more often

#556 AndreasSko closed 4 years ago
0
CI: Tests for Pull Requests & small fixes

#555 AndreasSko closed 4 years ago
5
:sparkles: Introduce Kubernetes runner

#554 AndreasSko closed 4 years ago
3
Use PyCurl for communicating with Pulsar (over REST)

#553 AndreasSko closed 4 years ago
0
Unresolved paths to some images, e.g `static/style/blue/ok_small.png`

#552 fgp closed 3 days ago
1
Ephemeris not available during Docker build in 19.09

#551 bedroesb closed 4 years ago
1
Bump psutil from 4.1.0 to 5.6.6 in /compose/galaxy-slurm

#550 dependabot[bot] closed 3 days ago
3
Bump psutil from 4.1.0 to 5.6.6 in /compose/galaxy-grafana

#549 dependabot[bot] closed 3 days ago
3
About can't use reference genome in docker.

#548 jackycsie closed 3 days ago
1
Fix typos

#547 nsoranzo closed 4 years ago
1
Refactor docker-compose setup

#546 AndreasSko closed 4 years ago
4
Fix 19.09 build

#545 abretaud closed 4 years ago
2
File upload not working

#544 VangelisTheodorakis closed 3 days ago
1
Galaxy postgresql password

#543 likku3 closed 4 years ago
2
Error in ./build-orchestration-images.sh --no-push --condor --grafana --slurm --k8s

#542 iuctf opened 4 years ago
0
blastn: error while loading shared libraries: libidn.so.11

#541 dfornika closed 4 years ago
1
19.09 release

#540 bgruening closed 4 years ago
8
Create a docker image from a running container

#538 mohan-XD closed 3 days ago
1
bug report: when using docker swarm build galaxy, we can't upload file.

#537 lizhi16 opened 4 years ago
1
Change galaxy user shell to /bin/bash

#535 abretaud closed 5 years ago
1
Configure postgres to make incremental backups by default

#532 chambm opened 5 years ago
2
Bump mercurial from 3.7.3 to 4.1.3 in /compose/galaxy-slurm

#531 dependabot[bot] closed 4 years ago
1
Bump ecdsa from 0.13 to 0.13.3 in /compose/galaxy-grafana

#530 dependabot[bot] closed 4 years ago
1
Bump ecdsa from 0.13 to 0.13.3 in /compose/galaxy-slurm

#529 dependabot[bot] closed 5 years ago
0
Doc fixes for 19.05 upgrade

#528 abretaud closed 5 years ago
7
Docs for upgrading postrgres don't work

#527 tdudgeon closed 5 years ago
6
Container can't be built

#526 dpryan79 closed 5 years ago
1
[WIP] Fix 1901 build

#525 osallou closed 5 years ago
6
README: use env vars for credentials

#524 osallou closed 5 years ago
1
19.05 update conda + fix slurm not starting

#523 abretaud closed 5 years ago
20
wrong permissions on /galaxy/upload_store

#522 tdudgeon closed 3 days ago
1
why admin user is created in Dockerfile?

#521 osallou opened 5 years ago
1
ERROR: Couldn't find env file: /home/docker-galaxy-stable/compose/.env

#519 lizhi16 closed 5 years ago
0
metadata detection for biom1 went wrong

#518 vebaev closed 3 days ago
1
Patch to allow successful build

#517 innovate-invent closed 3 days ago
3
Virtualenv failing

#516 innovate-invent closed 3 days ago
1
Orchestrated+Fat Galaxy

#515 ThomasWollmann opened 5 years ago
2
invocation_reports_2

#514 bgruening closed 5 years ago
1
Changes to config of nginx and supervisor are not persisted

#513 tdudgeon opened 5 years ago
2
WIP: More modular testing infrastructure

#512 bgruening closed 3 days ago
0
[compose] /export/venv should be part of galaxy-web and not galaxy-init

#511 pcm32 opened 5 years ago
3
Docker local tool does not detect available dataset

#510 mhabsaoui closed 3 days ago
1
Install tools from a local toolshed

#509 Tomnl closed 5 years ago
6
update compose to track release_19.05

#508 gmauro closed 5 years ago
1
update Dockerfile to track release_19.05

#507 gmauro closed 5 years ago
1

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