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bioinfomaticsCSU
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deepsignal
Detecting methylation using signal-level features from Nanopore sequencing reads
GNU General Public License v3.0
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download problems
#36
lqsae
closed
4 years ago
4
Feature extraction
#35
vahidAK
closed
4 years ago
1
Model training outputs many files and still runing
#34
vahidAK
closed
4 years ago
3
Installation Issue
#33
ckhithesh
closed
4 years ago
5
Model training, feature extraction error.
#32
vahidAK
closed
4 years ago
1
Result verification
#31
ritma001
closed
4 years ago
4
How long does it take to finish 30X human data?
#30
hd00ljy
closed
4 years ago
6
Don't import tensorflow when extracting features
#29
snajder-r
closed
4 years ago
1
Bump tensorflow from 1.8.0 to 1.12.2
#28
dependabot[bot]
closed
4 years ago
1
Non-CpG methylation calling
#27
vahidAK
closed
4 years ago
2
Your paper circle plot
#26
vahidAK
closed
4 years ago
1
deepsignal extract position file
#25
vahidAK
closed
4 years ago
2
It would be very nice if you could add cuda option to DeepSignal
#24
vahidAK
closed
4 years ago
2
How to calculate accuracy and other metrics by evaluate_mods_call.py?
#23
vahidAK
closed
4 years ago
2
Error while calling mod and assigning threads
#22
vahidAK
closed
4 years ago
10
self._sem._semlock._get_value() not implemented error
#21
ardakdemir
closed
4 years ago
5
Split extracted_features file and run methylation calling
#20
vahidAK
closed
4 years ago
5
Multi_read Fast5s
#19
vahidAK
opened
4 years ago
2
use newer tensorflow
#18
PengNi
opened
4 years ago
0
Get position of targeted base in reads event table
#17
pterzian
closed
4 years ago
3
Meaning of cent_signals
#16
cednotsed
closed
4 years ago
1
Extracting methy_label from fast5 files
#15
ardakdemir
closed
4 years ago
4
Add warning or more test when deleting content of model directory
#14
pterzian
closed
5 years ago
2
Training motif specific models
#13
pterzian
closed
4 years ago
10
How to get my files to basecall
#12
Hannah1746
closed
5 years ago
5
model_path
#11
Hannah1746
closed
5 years ago
4
Training a new model
#10
forrest1988
closed
5 years ago
2
running "deepsignal extract" without tombo.index
#9
Puputnik
closed
5 years ago
1
How to detect 6mA methylation using deepsignal?
#8
tianrenmao
closed
5 years ago
5
how to train a model
#7
ShangjinTan
closed
5 years ago
13
normalize prob0 and prob1 before output
#6
PengNi
closed
5 years ago
1
Expected results for example data set?
#5
eexwhyzee
closed
5 years ago
2
subprocess won't stop
#4
PengNi
closed
5 years ago
1
multiprocessing
#3
PengNi
closed
5 years ago
4
add options for RNA
#2
PengNi
opened
5 years ago
0
add a "region" option
#1
PengNi
opened
5 years ago
0
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