biomap-research scFoundation issues

biomap-research / scFoundation

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fixed

#36 shajiahang closed 9 hours ago
0
scFoundation gene embeddings for GEARS

#35 rvinas opened 3 days ago
4
Question about the Embedding Module

#34 ChaozhongLiu closed 2 days ago
2
CUDA Out of Memory Error when Running get_embedding.py on Small Dataset

#33 00dylan00 opened 6 days ago
1
Question for single cell type annotation using cell embeddings

#32 Zjianglin opened 1 week ago
1
Mapping embeddings

#31 lamasJose opened 1 week ago
4
DeepCDR dependencies

#30 chongtwd opened 2 weeks ago
1
CDR metadata

#29 biopzhang closed 2 weeks ago
1
How to get the gene name embedding

#28 oahux28 closed 2 weeks ago
4
About the pretraining resources

#27 BlenderWang9487 closed 3 weeks ago
2
API submission response

#26 chongtwd closed 2 weeks ago
2
API submission sample size issue

#25 Git-zhaohui closed 3 weeks ago
1
api example not working

#24 vinay-swamy closed 3 weeks ago
5
Clarification Requested on Parameter Settings for Embedding vs. Non-Embedding Models in SCAD Demo Usage

#23 LCGaoZzz closed 2 months ago
2
.

#22 LCGaoZzz closed 3 months ago
0
Pre-training script

#21 jonathanlimsc opened 3 months ago
2
pre-trained model's download link is broken

#20 znavoyan closed 3 weeks ago
1
How to get the output of the decoder?

#19 LCGaoZzz closed 3 months ago
5
Also glitches on extracting cell embeddings from API

#18 hansen7 closed 3 months ago
1
Bad Request, code: 400

#17 lihan97 closed 3 months ago
4
scFoundation how to call API for perturb-seq task?

#16 patricks-lab opened 6 months ago
1
When I was running the example.sh, as error had occured. Response code: 400.

#15 wangjin2945 closed 6 months ago
5
API is for pretrained embeddings?

#14 patricks-lab closed 3 months ago
1
Questions about using cell embeddings for cell type annotation

#13 HelloWorldLTY closed 6 months ago
3
Question for the configuration of SCAD task for Etoposide dataset

#12 KatarinaYuan closed 6 months ago
3
Question for running configuration for SCAD task

#11 KatarinaYuan closed 6 months ago
1
Question about Gene Identity in SCAD task

#10 KatarinaYuan closed 6 months ago
1
Results for scFoundation on other dataset in SCAD

#9 KatarinaYuan closed 7 months ago
1
Question for different ways of Inference for SCAD and DeepCDR

#8 KatarinaYuan closed 6 months ago
1
Request for more detailed introduction to the gene module inference task

#7 zhan8855 closed 7 months ago
1
Question for the number reported for the CDR task

#6 KatarinaYuan closed 7 months ago
1
A question about usage limitation

#5 HelloWorldLTY closed 7 months ago
1
Loading the result file issue_ for API single cell embedding

#4 Allamyh closed 3 months ago
4
Can not find healthy upstream url, please check your configuration!

#3 Allamyh closed 6 months ago
2
KeyError: 'total_count'

#2 qinbowen98 closed 9 months ago
1
Request for Releasing Pretraining Code

#1 shanchuanH closed 9 months ago
4