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blachlylab
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mucor3
Parses VCF data into tabular spreadsheets and aggregates data by sample
MIT License
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ion_rocksdb: atomizer cannot process vcf without samples/genotypes
#17
charlesgregory
opened
2 years ago
0
ion_rocksdb: Not appropriately dropping samples that have ref genotype
#16
charlesgregory
opened
2 years ago
0
ion_rocksdb: duplicated filters
#15
charlesgregory
opened
2 years ago
1
Replace filesystem-based inverted index with embedded KV store
#14
jblachly
opened
2 years ago
0
Speed up depthgauge
#13
Kekananen
opened
2 years ago
2
Off by 1 index error between AF calculations and depth calculations.
#12
Kekananen
closed
2 years ago
3
mucor3 atomize --flatten broken
#11
charlesgregory
opened
2 years ago
0
Merge python and D code
#10
charlesgregory
opened
2 years ago
0
Update documentation on the master branch
#9
Kekananen
opened
2 years ago
0
sample_indexer hardcodes some columns
#8
charlesgregory
closed
2 years ago
4
Need different vcf atomizer output modes
#7
charlesgregory
closed
2 years ago
1
review of outputs
#6
charlesgregory
opened
3 years ago
1
ID column sometimes NaN although INFO_dbsnp_ids is not
#5
charlesgregory
closed
5 years ago
0
Merged annotation fields out of order
#4
charlesgregory
closed
5 years ago
0
Pivoted dataset can have duplicate variant records
#3
charlesgregory
closed
5 years ago
0
Pivot table positive rate wrong denominator
#2
jblachly
closed
5 years ago
0
Pivot table improvement
#1
jblachly
closed
5 years ago
1