broadinstitute / cmQTL

High-dimensional phenotyping to define the genetic basis of cellular morphology
BSD 3-Clause "New" or "Revised" License
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carpenter-lab cellprofiler morphology primary-cells profiling quantitative-trait-loci

Cell Morphology Quantitative Trait Loci (cmQTL)

High-dimensional phenotyping to define the genetic basis of cellular morphology

Reproducibility

To reproduce the computational environment, first fork and clone the repository, then create and activate the conda environment.

# Using conda version > 4.6
conda env create --force --file environment.yml

# Activate environment
conda activate cmqtl