issues
search
broadinstitute
/
genetic-prevalence-estimator
https://genie.broadinstitute.org/
BSD 3-Clause "New" or "Revised" License
1
stars
0
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Update link styles
#39
nawatts
closed
3 years ago
0
Display consequence information for variants in variant list
#38
nawatts
closed
3 years ago
0
Store gnomAD version used to calculate prevalence for custom variant lists
#37
nawatts
closed
3 years ago
0
Import ClinVar variants from XML
#36
nawatts
opened
3 years ago
1
Change options for ClinVar variants included in gnomAD variant lists
#35
nawatts
closed
2 years ago
1
Handle filtered variants in calculations
#34
nawatts
closed
2 years ago
3
Validate transcript and gene match for gnomAD variant lists
#33
nawatts
closed
3 years ago
0
Select gnomAD variant lists based on transcript instead of gene
#32
nawatts
closed
3 years ago
0
Provide list of transcripts for selected gene
#31
nawatts
closed
3 years ago
0
Reorder options in variant list forms
#30
nawatts
closed
3 years ago
0
Clarify which ClinVar clinical significances are included in gnomAD variant lists
#29
nawatts
closed
3 years ago
0
Warn about low-confidence pLoF variants in gnomAD variant lists
#28
nawatts
closed
3 years ago
1
Change filtering logic for gnomAD variant lists
#27
nawatts
closed
3 years ago
0
Remove LOFTEE filters option for gnomAD variant lists
#26
nawatts
closed
3 years ago
0
Limit number of variant lists per user
#25
nawatts
closed
3 years ago
0
Show a warning if a custom variant list includes variants not found in gnomAD
#24
nawatts
closed
3 years ago
0
Show warning if a custom variant list includes variants that failed gnomAD QC filters
#23
nawatts
closed
3 years ago
0
Remove filtered variants from gnomAD variant lists
#22
nawatts
closed
3 years ago
3
Require a transcript for gnomAD variant lists
#21
nawatts
closed
3 years ago
0
Include all gnomAD variants in data pipeline
#20
nawatts
closed
3 years ago
0
Move LOFTEE and ClinVar filters from variant list to prevalence calculation?
#19
nawatts
closed
3 years ago
1
Add variant list metadata to variant list page
#18
nawatts
closed
3 years ago
0
Create separate nox sessions for running Pylint on data pipelines and worker
#17
nawatts
closed
3 years ago
0
Add option to include filtered variants
#16
nawatts
closed
3 years ago
1
Exclude filtered variants from gnomAD variant lists
#15
nawatts
closed
3 years ago
4
Filter out AC = 0 variants
#14
nawatts
closed
3 years ago
0
Limit number of variants for custom variant lists
#13
nawatts
closed
3 years ago
0
Add field for user facing status messages
#12
nawatts
opened
3 years ago
0
Decide how to handle filtered variants
#11
nawatts
closed
3 years ago
5
Install GCS connector in worker's Docker image
#10
nawatts
closed
2 years ago
0
Search genes by symbol
#9
nawatts
closed
3 years ago
0
Allow downloading variant list with annotations and allele frequencies
#8
nawatts
closed
3 years ago
1
Automatically refresh variant list when queued or processing
#7
nawatts
closed
3 years ago
0
Improve validation for worker requests
#6
nawatts
closed
3 years ago
0
Accept additional variant ID formats
#5
nawatts
closed
3 years ago
0
Optimize database queries
#4
nawatts
opened
3 years ago
0
Allow retrying a failed variant list request
#3
nawatts
closed
2 years ago
2
Add stats page with number of variant lists queued / processing
#2
nawatts
closed
3 years ago
0
Use Django permissions to check if user can view variant list fields
#1
nawatts
closed
3 years ago
0
Previous