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bvilhjal
/
ldpred
MIT License
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HapMap3 as LD reference
#163
lizlitkowski
opened
7 months ago
0
fraction selection
#162
bnj50
opened
3 years ago
0
Make all unit tests pass on Windows
#161
Kazuki-TAKEDA
opened
3 years ago
0
LDpred installation problems
#160
mdahmad
opened
3 years ago
0
Error: LD reference does not seem to match the coordinated SNP data
#159
danjweiner
opened
3 years ago
0
SNPs retained after filtering
#158
bbitarello
opened
3 years ago
0
LD reference panel and target genotype
#157
Qiaolan
opened
3 years ago
1
effalt in the summary statistics
#156
jystatistics
opened
3 years ago
0
Standardized genotype data in Step 3 (ldpred score)
#155
ChongWu-Biostat
opened
3 years ago
0
Inverse Correlation between PRS and phenotype
#154
gat2010
opened
3 years ago
1
LD_RADIUS
#153
marine11
opened
3 years ago
1
Unable to find Phenotype values - 1.0.11
#152
gat2010
closed
3 years ago
0
keyError: 'raw_snps'
#151
jielab
opened
3 years ago
9
AssertionError in gibbs sampling step
#150
PradoVarathan
opened
4 years ago
0
Fix a bug where get_beta could have opposite sign
#149
fumi-github
opened
4 years ago
1
Running LDpred without running setup.py
#148
choishingwan
closed
4 years ago
4
KeyError: 'CT'
#147
marine11
opened
4 years ago
1
KeyError: "Unable to open object (object 'cord_data' doesn't exist)"
#146
bbitarello
closed
3 years ago
3
Possible defect when disabling MAF, version 1.0.11
#145
erez-odna
opened
4 years ago
2
Bug report for computing z scores from p-values
#144
mxcai
opened
4 years ago
1
Unable to open object (object 'ns' doesn't exist) error in ldpred gibbs
#143
annashcherbina
opened
4 years ago
2
Question: Infinitesimal model x P = 1
#142
souzadevinicius
closed
1 year ago
0
Explicit output definitions
#141
shoagun
opened
4 years ago
0
Potential bug in plinkfiles.py
#140
stormliucong
opened
4 years ago
0
Diseased samples got lower PRS than healthy samples
#139
gyni
opened
4 years ago
4
Basic question regarding how to run
#138
Sabor117
opened
4 years ago
0
KeyError: '1' - Score method
#137
souzadevinicius
closed
1 year ago
1
IndexError: pop from empty list
#136
chokriNao
opened
4 years ago
3
KeyError in ldpred fast
#135
gulumk
opened
4 years ago
2
Update ldpred docker image
#134
hyjkim
closed
4 years ago
0
what does effalt in STANDARD really refers to?
#133
mathieu-lemire
opened
4 years ago
1
Write all output in a log file by default
#132
bvilhjal
opened
4 years ago
0
KeyError during coord genotypes
#131
pgormley
opened
4 years ago
8
Question about Output files
#130
hrafnfaedhir
opened
4 years ago
0
Can LDpred run for each chromosome now?
#129
ChongWu-Biostat
closed
4 years ago
3
Support parsing of bgen files
#128
bvilhjal
opened
4 years ago
0
Support plink file parsing using pandas-plink
#127
bvilhjal
opened
4 years ago
0
Passes use_hickle to appropriate function calls
#126
hyjkim
closed
4 years ago
1
The posterior mean is not a real number?
#125
BeatrizCortes
opened
4 years ago
8
Best correlation score
#124
giuliapontali
closed
4 years ago
4
EOFError: Ran out of input
#123
KClaudio21
opened
4 years ago
1
pass use_hickle to _serialize_ld_info_
#122
hyjkim
closed
4 years ago
1
get_ld_dict does not pass use_hickle into _serialize_ld_info_
#121
hyjkim
closed
4 years ago
0
Diseased samples got lower PRS than healthy samples
#120
Qinqiword
closed
4 years ago
4
Develop
#119
bvilhjal
closed
4 years ago
0
update develop
#118
bvilhjal
closed
4 years ago
0
updating develop
#117
bvilhjal
closed
4 years ago
0
updating develop to latest
#116
bvilhjal
closed
4 years ago
0
Bigmerge
#115
bvilhjal
closed
4 years ago
0
Bigmerge
#114
bvilhjal
closed
4 years ago
0
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