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calico
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borzoi
RNA-seq prediction with deep convolutional neural networks.
Apache License 2.0
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Baskerville requires TensorFlow 2.15, but Borzoi requires TensorFlow 2.12. How should I install them?
#25
liameihao
opened
17 hours ago
0
Fine tuning?
#24
kawairine
opened
3 weeks ago
1
Revision update to some scripts and example notebooks.
#23
johli
closed
2 months ago
0
Update borzoi_example_eqtl_chr10_116952944_T_C.ipynb
#22
Delayed-Gitification
opened
3 months ago
1
Exception encountered when calling layer "ensemble_shift" (type EnsembleShift).
#21
Delayed-Gitification
opened
3 months ago
2
fix build_ensemble argument typos in example notebooks
#20
othertea
opened
4 months ago
0
Added a few missing evaluation/inference scripts.
#19
johli
closed
5 months ago
0
Updated model evaluation scripts.
#18
johli
closed
5 months ago
0
Added training data and QTL scripts
#17
johli
closed
5 months ago
1
Tissue specificity of model predictions
#16
fojackson8
opened
7 months ago
0
Size of the final cropping layer
#15
avantikalal
opened
7 months ago
0
Weights of the mouse head
#14
gokceneraslan
opened
8 months ago
2
TypeError in borzoi_example_eqtl_chr10_116952944_T_C.ipynb
#13
Yaoyx
opened
9 months ago
0
final conv block
#12
samuel-g-bates
opened
10 months ago
0
Clarification of model fold data splits
#11
adamyhe
closed
10 months ago
2
Curated QTL data download
#10
gonzalobenegas
closed
4 months ago
3
add gcs capability
#9
lruizcalico
closed
11 months ago
0
The targets table missing
#8
louadi
closed
12 months ago
3
ImportError: cannot import name 'stream' from 'baskerville'
#7
louadi
closed
5 months ago
0
Reading TFRecords and extracting sequence information.
#6
andreaskapou
closed
11 months ago
2
Revise qtl notebooks
#5
johli
closed
1 year ago
0
How do you make tissue-specific predictions using DNA sequence?
#4
fojackson8
closed
1 year ago
1
example of training model
#3
wawpaopao
opened
1 year ago
0
revise eqtl
#2
davek44
closed
1 year ago
1
Genome folds
#1
casblaauw
closed
1 year ago
1