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cambiotraining
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awd-pathogen-bioinformatics
Materials for "Introduction to Cholera Genomics" course
https://cambiotraining.github.io/awd-pathogen-bioinformatics
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Test Nextflow pipelines on cholera course data
#18
tavareshugo
opened
5 months ago
2
Add Klebsiella example
#17
tavareshugo
opened
6 months ago
0
Add BIGSdb-Pasteur
#16
tavareshugo
opened
6 months ago
0
Update to use Nextflow pipelines bacQC-ONT and assembleBAC-ONT
#15
tavareshugo
opened
7 months ago
2
Material updates - debrief follow-up
#14
tavareshugo
opened
9 months ago
0
cgMLST
#13
tavareshugo
opened
9 months ago
0
additions to materials
#12
tavareshugo
closed
9 months ago
2
Environments for the pipeline
#11
bsalehe
closed
10 months ago
1
Pipeline revisions - kraken, flye, etc
#10
tavareshugo
closed
10 months ago
2
Public datasets
#9
tavareshugo
opened
11 months ago
0
Panaroo for Phylogenetics
#8
bsalehe
closed
9 months ago
0
Trainer guidelines
#7
tavareshugo
closed
9 months ago
0
Section revisions
#6
tavareshugo
closed
9 months ago
0
Prepare data
#5
tavareshugo
closed
9 months ago
0
Tests on Windows
#4
tavareshugo
closed
9 months ago
2
Other resources
#3
tavareshugo
opened
11 months ago
0
Develop assessment quiz
#2
tavareshugo
opened
11 months ago
0
Development notes
#1
tavareshugo
closed
9 months ago
0