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ccgd-profile
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BreaKmer
A method to identify structural variation from sequencing data in target regions
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Breakmer 0.0.6 profile ccgd production
#37
mducar
closed
5 years ago
0
installation problems
#36
mforde84
opened
6 years ago
1
BreaKmer - error prepare_reference_data
#35
GuillaumeMEXP
opened
6 years ago
1
NameError: global name 'sort' is not defined
#34
Tinalxt
opened
7 years ago
7
Where to start?
#33
dsmarcoantonio
opened
7 years ago
2
Implementation of an "insertion-only" mode
#32
leon8889
opened
7 years ago
1
Breakmer 0.0.6 b
#31
shanguangyu
closed
5 years ago
1
I meet another problem
#30
DNA-language
closed
8 years ago
2
Translocations not called?
#29
signy-chow
closed
8 years ago
5
pysam.sort error
#28
ycl6
closed
8 years ago
3
Missing path/executable for gfserver
#27
ycl6
closed
8 years ago
2
unsupported operand type
#26
radaniba
closed
8 years ago
2
How to fix the 15min gServer issue
#25
radaniba
opened
8 years ago
5
breakmer removes arbitrary n regions
#24
radaniba
opened
8 years ago
3
Which production version is the latest ?
#23
radaniba
closed
8 years ago
4
Blat locally
#22
radaniba
closed
8 years ago
0
Cutadapt failed to run
#21
radaniba
closed
8 years ago
1
Issue running the example
#20
radaniba
closed
8 years ago
2
ValueError: start out of range (-199)
#19
bcolb
closed
8 years ago
2
No reads processed/No Output
#18
bcolb
closed
8 years ago
6
Why the requirement that the config file have no comment lines starting with #
#17
duartemolha
closed
8 years ago
3
reformat the <analysis_name>_svs.all.out file
#16
apastore
closed
8 years ago
8
NameError: global name 'binary' is not defined
#15
apastore
closed
9 years ago
0
NameError: global name 'binary' is not defined
#14
apastore
closed
9 years ago
1
ValueError: too many values to unpack
#13
cruckert
closed
9 years ago
4
set_reference_data not setting readLen properly
#12
dgaston
closed
9 years ago
1
Documentation/Help issues
#11
dgaston
closed
9 years ago
1
Issues running example
#10
skillcoyne
closed
9 years ago
2
option to specify port for blat
#9
jasper1918
closed
9 years ago
4
"reference_data" issue
#8
fcgportal
closed
8 years ago
1
Mate not found!
#7
ryanabo
opened
9 years ago
0
Use BLAST for local realignment to target sequence rather than BLAT
#6
ryanabo
opened
9 years ago
0
Taking too long to run!
#5
ryanabo
opened
9 years ago
3
HG19 and GRCh format
#4
huangchv
closed
9 years ago
9
Issue using BreaKmer
#3
vonholdt
closed
9 years ago
1
Bug
#2
pascalg
closed
9 years ago
2
BAM files with : in header
#1
pascalg
closed
9 years ago
3